RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 TMEM86BQ8N661 226 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 OR5R1Q8NH85 324 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 ZFAND1Q8TCF1 268 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 SSMEM1Q8WWF3 244 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 GPHA2Q96T91 129 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 RTBDNQ9BSG5 229 aaPredicted RBP10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 PALMDQ9NP74 551 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 SLC2A9Q9NRM0 540 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 VSIG4Q9Y279 399 aa10.15□□□□□ -0.78
CHMP2A-206ENST00000600118 H3BUX3 64 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 CLDN34H7C241 214 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 HOXA3O43365 443 aaPredicted RBP10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 TNFSF12O43508 249 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 NDUFB6O95139 128 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 SNRNP70P08621 437 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 PI3P19957 117 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 CD24P25063 80 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 MC5RP33032 325 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 BRWD1-AS2P59051 145 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 HILS1P60008 231 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 RBMS2Q15434 407 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 PHLDA2Q53GA4 152 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 C16orf87Q6PH81 154 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 RBMS3Q6XE24 437 aaKnown RBP10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 Q8N6K4 173 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 ZDHHC22Q8N966 263 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 ZNF418Q8TF45 676 aaPredicted RBP10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 CAPSLQ8WWF8 208 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 SCGB3A2Q96PL1 93 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 DPAGT1Q9H3H5 408 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 ESM1Q9NQ30 184 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 TCF19Q9Y242 345 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 POMT1Q9Y6A1 747 aa10.14□□□□□ -0.79
CHMP2A-206ENST00000600118 A0A0A6YYJ9 748 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 A6NDX4 124 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 FAM106CPP0CH98 169 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 PIGPP57054 158 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 TAGLNQ01995 201 aaKnown RBP10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 SLC9A3R2Q15599 337 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 CCBE1Q6UXH8 406 aaPredicted RBP10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 KCTD9Q7L273 389 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 LURAP1LQ8IV03 231 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 TCTEX1D2Q8WW35 142 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 RBMXL1Q96E39 390 aaKnown RBP10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 EAF1Q96JC9 268 aaPredicted RBP10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 SLC35D1Q9NTN3 355 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 WASHC3Q9Y3C0 194 aa10.13□□□□□ -0.79
CHMP2A-206ENST00000600118 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 RNF212BA8MTL3 300 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 MPPED1O15442 326 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 RBFOX2O43251 390 aaKnown RBP eCLIP10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 IGKV1D-33P01593 117 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 IGKV1-33P01594 117 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 APOA2P02652 100 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 IGKV1-16P04430 117 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 RLN1P04808 185 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 RRASP10301 218 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 F2RP25116 425 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 S100GP29377 79 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 DEFA1P59665 94 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 DEFA3P59666 94 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 DCTN2Q13561 401 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 ABCA11PQ4W5N1 156 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 MZT2BQ6NZ67 158 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 TBC1D26Q86UD7 250 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 PDPNQ86YL7 162 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 ADAD2Q8NCV1 583 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 OR2T10Q8NGZ9 312 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 TMEM230Q96A57 120 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 VPREB3Q9UKI3 123 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 C14orf166Q9Y224 244 aaKnown RBP10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 PRELID3BQ9Y3B1 194 aa10.12□□□□□ -0.79
CHMP2A-206ENST00000600118 BTBD17A6NE02 478 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 MOSP00540 346 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 TCRBP04435 133 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 KIR2DS2P43631 304 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 CATR1Q13166 79 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 LY6EQ16553 131 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 RTL8BQ17RB0 113 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 TMEM177Q53S58 311 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 DHRS7BQ6IAN0 325 aaPredicted RBP10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 TCTEX1D1Q8N7M0 179 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 CCDC71LQ8N9Z2 235 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 POC5Q8NA72 575 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 DUSP18Q8NEJ0 188 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 OR51H1Q8NH63 302 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 RITA1Q96K30 269 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 JMJD8Q96S16 334 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 RNF5Q99942 180 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 CHIAQ9BZP6 476 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 PLSCR3Q9NRY6 295 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 FAM212BQ9NTI7 297 aaPredicted RBP10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 COPZ2Q9P299 210 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 FLVCR2Q9UPI3 526 aa10.11□□□□□ -0.79
CHMP2A-206ENST00000600118 FAM240BA0A1B0GVZ2 78 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 CRYM-AS1A6NIL9 109 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 H0Y980 276 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 H7C2Y5 167 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 TCF21O43680 179 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms