RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 LFNGQ8NES3 379 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 OR4A4PQ8NGN8 299 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 OR6Q1Q8NGQ2 317 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 OR10J5Q8NHC4 309 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 NRG4Q8WWG1 115 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 RAB3CQ96E17 227 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 MS4A10Q96PG2 267 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 ASCL2Q99929 193 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 ZNF355PQ9NSJ1 428 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 SLC35D1Q9NTN3 355 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 RAB22AQ9UL26 194 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 BLOC1S6Q9UL45 172 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 GAB2Q9UQC2 676 aa7.58□□□□□ -1.2
VRK3-216ENST00000599342 RBM7Q9Y580 266 aaKnown RBP7.58□□□□□ -1.2
VRK3-216ENST00000599342 IGKV1-6A0A0C4DH72 117 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 ARPC1BO15143 372 aaKnown RBP7.57□□□□□ -1.2
VRK3-216ENST00000599342 LDLRAD4O15165 306 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 FABP7O15540 132 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 SLC25A17O43808 307 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 CNIH1O95406 144 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 TRGV3P03979 118 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 FCGR3AP08637 254 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 MAP2K4P45985 399 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 HSPA13P48723 471 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 FXYD3Q14802 87 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 TBCEQ15813 527 aaPredicted RBP7.57□□□□□ -1.2
VRK3-216ENST00000599342 ACSM6Q6P461 480 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 ZNF367Q7RTV3 350 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 CNBD2Q96M20 576 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 HARBI1Q96MB7 349 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 OR4C12Q96R67 309 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 OR2D2Q9H210 308 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
VRK3-216ENST00000599342 A0A075B6Q4 140 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 C13orf42A0A1B0GVH6 325 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 H3BUA1 57 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 PROP1O75360 226 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 GP9P14770 177 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 SPNP16150 400 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 GNB3P16520 340 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 LINC00205P59089 165 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 TAGLNQ01995 201 aaKnown RBP7.56□□□□□ -1.2
VRK3-216ENST00000599342 RTL8BQ17RB0 113 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 MOGAT2Q3SYC2 334 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 IGSF11Q5DX21 431 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 IZUMO2Q6UXV1 221 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 POC5Q8NA72 575 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 OR10R2Q8NGX6 335 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 GINS4Q9BRT9 223 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 CABLES2Q9BTV7 478 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 CENPOQ9BU64 300 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 RSRP1Q9BUV0 290 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 ELOVL1Q9BW60 279 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 SDHAF2Q9NX18 166 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 KCNK7Q9Y2U2 307 aa7.56□□□□□ -1.2
VRK3-216ENST00000599342 TRBV6-7A0A0A0MS04 114 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 TRAV1-2A0A0B4J238 106 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 A0A0G2JLM5 398 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 METTL21EPA6NDL7 271 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 IFITM5A6NNB3 132 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 SHOXO15266 292 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 DIRAS3O95661 229 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 GSTT2P0CG29 244 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 GSTT2BP0CG30 244 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 RRASP10301 218 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 HIST1H1DP16402 221 aaKnown RBP7.55□□□□□ -1.2
VRK3-216ENST00000599342 RAB3BP20337 219 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 RAB6AP20340 208 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 ZP3P21754 424 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 TALDO1P37837 337 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 LGALS7P47929 136 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 OR10A3P58181 314 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 PLA2G7Q13093 441 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 ARFRP1Q13795 201 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 MAFIPQ8WZ33 124 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 RHOVQ96L33 236 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 TMEM68Q96MH6 324 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 PHB2Q99623 299 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 RANGRFQ9HD47 186 aaPredicted RBP7.55□□□□□ -1.2
VRK3-216ENST00000599342 NDUFB11Q9NX14 153 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 STUB1Q9UNE7 303 aa7.55□□□□□ -1.2
VRK3-216ENST00000599342 MFNGO00587 321 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 IGLV2-23P01705 113 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
VRK3-216ENST00000599342 ARL6IP1Q15041 203 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 SSX1Q16384 188 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 SRSF7Q16629 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
VRK3-216ENST00000599342 VMA21Q3ZAQ7 101 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 ANKRD13BQ86YJ7 626 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 BVESQ8NE79 360 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 OR5T1Q8NG75 326 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 ADTRPQ96IZ2 230 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 ATG5Q9H1Y0 275 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 COA4Q9NYJ1 87 aa7.54□□□□□ -1.2
VRK3-216ENST00000599342 ZNF230Q9UIE0 474 aaPredicted RBP7.54□□□□□ -1.2
VRK3-216ENST00000599342 TRDV1A0A1B0GX56 115 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 C3orf84H3BNL1 204 aa7.53□□□□□ -1.2
VRK3-216ENST00000599342 RAB27BO00194 218 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms