RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 C5orf56Q8N8D9 126 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 TMEM229BQ8NBD8 167 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 ZBTB34Q8NCN2 500 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 OR6F1Q8NGZ6 308 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 MOB3AQ96BX8 217 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 BATF3Q9NR55 127 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 V9GYH0 126 aa16.18■□□□□ 0.18
PNKP-211ENST00000598020 J3QRK9 145 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 CD74P04233 296 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 TAS2R19P59542 299 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 EIF4EBP1Q13541 118 aaPredicted RBP16.17■□□□□ 0.18
PNKP-211ENST00000598020 C12orf54Q6X4T0 127 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 PDPNQ86YL7 162 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 OR2T6Q8NHC8 308 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 DDB2Q92466 427 aa16.17■□□□□ 0.18
PNKP-211ENST00000598020 ZNF2Q9BSG1 426 aaPredicted RBP16.17■□□□□ 0.18
PNKP-211ENST00000598020 APOA2P02652 100 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 CD3DP04234 171 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 F2RL1P55085 397 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 PROK1P58294 105 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 LINC00205P59089 165 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 HERV-K104P61576 105 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 FAM71E2Q8N5Q1 922 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 Q8N9W7 124 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 NPBQ8NG41 125 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 RITA1Q96K30 269 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 SLC5A7Q9GZV3 580 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 TAS2R8Q9NYW2 309 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 RNF114Q9Y508 228 aa16.16■□□□□ 0.18
PNKP-211ENST00000598020 NCBP2LA6PVI3 153 aaKnown RBP16.15■□□□□ 0.18
PNKP-211ENST00000598020 H7C2Y5 167 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 CSF1P09603 554 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 RRASP10301 218 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 TSPAN5P62079 268 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 ABCA11PQ4W5N1 156 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 RNASE10Q5GAN6 216 aaKnown RBP16.15■□□□□ 0.18
PNKP-211ENST00000598020 SPANXN2Q5MJ10 180 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 Q6ZS46 218 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 ARRDC1Q8N5I2 433 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 SECTM1Q8WVN6 248 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 BORCS5Q969J3 196 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 RBMXL1Q96E39 390 aaKnown RBP16.15■□□□□ 0.18
PNKP-211ENST00000598020 HSD17B10Q99714 261 aaKnown RBP16.15■□□□□ 0.18
PNKP-211ENST00000598020 CCL28Q9NRJ3 127 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 SLC35D1Q9NTN3 355 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 SERTAD4Q9NUC0 356 aa16.15■□□□□ 0.18
PNKP-211ENST00000598020 LIN7CQ9NUP9 197 aaKnown RBP16.15■□□□□ 0.18
PNKP-211ENST00000598020 LINC00473A8K010 186 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 NDUFA3O95167 84 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 FXYD4P59646 89 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 ZNF79Q15937 498 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 ZNF66Q6ZN08 573 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 ZNF747Q9BV97 191 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 TINAGL1Q9GZM7 467 aaPredicted RBP16.14■□□□□ 0.17
PNKP-211ENST00000598020 SIGLEC9Q9Y336 463 aa16.14■□□□□ 0.17
PNKP-211ENST00000598020 TENM1Q9UKZ4 2725 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 M0QYG6 137 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 NBR2O15453 112 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 IGKV1-16P04430 117 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 IFNA6P05013 189 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 GNRHRP30968 328 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 UCP3P55916 312 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 MMDQ15546 238 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 TMEM177Q53S58 311 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 STEAP1BQ6NZ63 245 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 LINC00299Q6ZSB3 139 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 TMEM17Q86X19 198 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 BVESQ8NE79 360 aa16.13■□□□□ 0.17
PNKP-211ENST00000598020 FLYWCH2Q96CP2 140 aaKnown RBP16.13■□□□□ 0.17
PNKP-211ENST00000598020 THAP7Q9BT49 309 aaPredicted RBP16.13■□□□□ 0.17
PNKP-211ENST00000598020 ANKRD20A5PA0PJZ0 165 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 RAB3DO95716 219 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 LGALS7P47929 136 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 RPL30P62888 115 aaKnown RBP16.12■□□□□ 0.17
PNKP-211ENST00000598020 MEF2DQ14814 521 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 RTL8BQ17RB0 113 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 CNPY1Q3B7I2 92 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 PYDC2Q56P42 97 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 LPCAT3Q6P1A2 487 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 ZNF818PQ6ZRF7 136 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 LHFPL1Q86WI0 220 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 MFSD4AQ8N468 514 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 C3orf56Q8N813 242 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 WFDC12Q8WWY7 111 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 RASL11BQ9BPW5 248 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 FXYD6Q9H0Q3 95 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 PRELID3BQ9Y3B1 194 aa16.12■□□□□ 0.17
PNKP-211ENST00000598020 SH2D7A6NKC9 451 aaPredicted RBP16.11■□□□□ 0.17
PNKP-211ENST00000598020 SPDEFO95238 335 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 IGHG2P01859 326 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 CNTFRP26992 372 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 CBX3Q13185 183 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 C5orf64Q2M2E5 130 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 AADACL3Q5VUY0 350 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 KCTD9Q7L273 389 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 Q8N402 240 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 OR4D10Q8NGI6 311 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 TSNAXQ99598 290 aaKnown RBP16.11■□□□□ 0.17
PNKP-211ENST00000598020 WNT10AQ9GZT5 417 aa16.11■□□□□ 0.17
PNKP-211ENST00000598020 KIAA1456Q9P272 454 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms