RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 C6orf201Q7Z4U5 140 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 MS4A15Q8N5U1 240 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 LFNGQ8NES3 379 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 SETD6Q8TBK2 473 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 TMEM68Q96MH6 324 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 SPATA25Q9BR10 227 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 FAAP24Q9BTP7 215 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 PLEKHJ1Q9NW61 149 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 TENM2Q9NT68 2774 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 FCN1O00602 326 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 BPNT1O95861 308 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 IFNA6P05013 189 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 EGR2P11161 476 aaPredicted RBP13.07□□□□□ -0.32
PNKP-210ENST00000597965 VEGFCP49767 419 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 TATDN3Q17R31 274 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 RPL39P5Q59GN2 51 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 CASTOR1Q8WTX7 329 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 PHYHIPQ92561 330 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 TM2D1Q9BX74 207 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 ZNF355PQ9NSJ1 428 aa13.07□□□□□ -0.32
PNKP-210ENST00000597965 TRBV6-6A0A0A6YYG2 114 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 AIREO43918 545 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 CA2P00918 260 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 APOA2P02652 100 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 ZNF182P17025 639 aaPredicted RBP13.06□□□□□ -0.32
PNKP-210ENST00000597965 CEACAM6P40199 344 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 RANBP1P43487 201 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 TPBGQ13641 420 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 PSG5Q15238 335 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 ZNF880Q6PDB4 577 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 GTSCR1Q86UQ5 136 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 PDPNQ86YL7 162 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 CLCC1Q96S66 551 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 AGMATQ9BSE5 352 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 FAM103A1Q9BTL3 118 aaKnown RBP13.06□□□□□ -0.32
PNKP-210ENST00000597965 URM1Q9BTM9 101 aaKnown RBP13.06□□□□□ -0.32
PNKP-210ENST00000597965 OR51E2Q9H255 320 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 C19orf73Q9NVV2 129 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 ZNF221Q9UK13 617 aa13.06□□□□□ -0.32
PNKP-210ENST00000597965 AADACP22760 399 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 VBP1P61758 197 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 NCS1P62166 190 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
PNKP-210ENST00000597965 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
PNKP-210ENST00000597965 C1orf100Q5SVJ3 147 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 GLDNQ6ZMI3 551 aaPredicted RBP13.05□□□□□ -0.32
PNKP-210ENST00000597965 Q8N1Y9 231 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 POC5Q8NA72 575 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 PTX4Q96A99 478 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 ABHD14BQ96IU4 210 aa13.05□□□□□ -0.32
PNKP-210ENST00000597965 CNIH1O95406 144 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 ARSBP15848 533 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 HTR2CP28335 458 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 FXYD3Q14802 87 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 ACSM3Q53FZ2 586 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 C5orf24Q7Z6I8 188 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 OR9G4Q8NGQ1 327 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 IL17DQ8TAD2 202 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 GAB2Q9UQC2 676 aa13.04□□□□□ -0.32
PNKP-210ENST00000597965 BRI3O95415 125 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 SRMP19623 302 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 LGALS7P47929 136 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 HLA-DRB3P79483 266 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 TAGLNQ01995 201 aaKnown RBP13.03□□□□□ -0.32
PNKP-210ENST00000597965 CBX3Q13185 183 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 TIMM50Q3ZCQ8 353 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 LCN12Q6JVE5 192 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.03□□□□□ -0.32
PNKP-210ENST00000597965 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 GRPEL2Q8TAA5 225 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 DYNC2LI1Q8TCX1 351 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 C11orf54Q9H0W9 315 aaPredicted RBP13.03□□□□□ -0.32
PNKP-210ENST00000597965 TUBA4BQ9H853 241 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 DNAH7Q8WXX0 4024 aa13.03□□□□□ -0.32
PNKP-210ENST00000597965 DYNC2H1Q8NCM8 4307 aaKnown RBP13.03□□□□□ -0.32
PNKP-210ENST00000597965 TMEM14DPA8MWL7 114 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 TGFBR1P36897 503 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 SERPINB10P48595 397 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
PNKP-210ENST00000597965 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 OR10K2Q6IF99 312 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 UFD1Q92890 307 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 USMG5Q96IX5 58 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 NICN1Q9BSH3 213 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 CENPOQ9BU64 300 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 SIGLEC8Q9NYZ4 499 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 HSF4Q9ULV5 492 aa13.02□□□□□ -0.33
PNKP-210ENST00000597965 SLC25A17O43808 307 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 PSMA1P25786 263 aaKnown RBP13.01□□□□□ -0.33
PNKP-210ENST00000597965 UNC119Q13432 240 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 HSD17B12Q53GQ0 312 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 Q8N402 240 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms