RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ZBTB34Q8NCN2 500 aa17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 TERB2Q8NHR7 220 aa17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 ADTRPQ96IZ2 230 aa17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 EAF1Q96JC9 268 aaPredicted RBP17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 AKR1E2Q96JD6 320 aa17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 WDR12Q9GZL7 423 aaKnown RBP17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 HRASLSQ9HDD0 168 aa17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 RAB18Q9NP72 206 aa17.71■□□□□ 0.43
CHMP2A-204ENST00000597848 LINC00854A0A1B0GVQ3 168 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 H0YJW9 148 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 IL7P13232 177 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 GNRHRP30968 328 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 DUTP33316 252 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 PPP5CP53041 499 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 EBI3Q14213 229 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 MSMO1Q15800 293 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 AADACL3Q5VUY0 350 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 DHRS7BQ6IAN0 325 aaPredicted RBP17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 ZNF818PQ6ZRF7 136 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 OR5AN1Q8NGI8 311 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 OR51S1Q8NGJ8 323 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 ZFAND2BQ8WV99 257 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 HSD17B10Q99714 261 aaKnown RBP17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 PRRT1Q99946 306 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 SLC25A33Q9BSK2 321 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 SLC35D1Q9NTN3 355 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 WASHC3Q9Y3C0 194 aa17.7■□□□□ 0.42
CHMP2A-204ENST00000597848 CHST1O43916 411 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 OR2F2O95006 317 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 UCP3P55916 312 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 ZNF66Q6ZN08 573 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 LHFPL1Q86WI0 220 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 CMTM1Q8IZ96 169 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 TCTEX1D2Q8WW35 142 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 RBM14Q96PK6 669 aaKnown RBP17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 GPHA2Q96T91 129 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 SCP2D1Q9UJQ7 156 aa17.69■□□□□ 0.42
CHMP2A-204ENST00000597848 LINC00473A8K010 186 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 GPR31O00270 319 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 CD40LGP29965 261 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 TAGLNQ01995 201 aaKnown RBP17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 CBX3Q13185 183 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 IDO2Q6ZQW0 420 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 KCTD9Q7L273 389 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 C16orf82Q7Z2V1 217 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 SLC38A6Q8IZM9 456 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 BVESQ8NE79 360 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 CCDC32Q9BV29 185 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 PRELID3BQ9Y3B1 194 aa17.68■□□□□ 0.42
CHMP2A-204ENST00000597848 NCBP2LA6PVI3 153 aaKnown RBP17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 S100GP29377 79 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 RPL30P62888 115 aaKnown RBP17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 RTL8BQ17RB0 113 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 PHLDA2Q53GA4 152 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 PDPNQ86YL7 162 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 MARCH1Q8TCQ1 289 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 DEDD2Q8WXF8 326 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 RSRP1Q9BUV0 290 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 C2CD3Q4AC94 2353 aa17.67■□□□□ 0.42
CHMP2A-204ENST00000597848 FCGR3BO75015 233 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 PEX14O75381 377 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 RRASP10301 218 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 RPL15P61313 204 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 RPS16P62249 146 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 CATR1Q13166 79 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 EIF4EBP1Q13541 118 aaPredicted RBP17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 ABCA11PQ4W5N1 156 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 OR2B11Q5JQS5 317 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 Q8N6K4 173 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 ZFAND1Q8TCF1 268 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 TAF15Q92804 592 aaKnown RBP eCLIP17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 FLYWCH2Q96CP2 140 aaKnown RBP17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 RITA1Q96K30 269 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 NPFFR1Q9GZQ6 430 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 MOB4Q9Y3A3 225 aa17.66■□□□□ 0.42
CHMP2A-204ENST00000597848 ZFHX3Q15911 3703 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 PGLYRP1O75594 196 aaPredicted RBP17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 PI3P19957 117 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 ECI1P42126 302 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 OR13C8Q8NGS7 320 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 OR51H1Q8NH63 302 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 DDB2Q92466 427 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 SLC2A8Q9NY64 477 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 C1RLQ9NZP8 487 aa17.65■□□□□ 0.42
CHMP2A-204ENST00000597848 CENPXA8MT69 81 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 RNF212BA8MTL3 300 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 M0QZK8 103 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 IGKV1-16P04430 117 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 RLN1P04808 185 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 F2RL1P55085 397 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 MMDQ15546 238 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 KRTAP24-1Q3LI83 254 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 OR8H1Q8NGG4 311 aa17.64■□□□□ 0.41
CHMP2A-204ENST00000597848 NAP1L6A6NFF2 107 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 CRYZL1O95825 349 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 KIR2DS2P43631 304 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 POC5Q8NA72 575 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 OR4C13Q8NGP0 309 aa17.63■□□□□ 0.41
CHMP2A-204ENST00000597848 TMEM158Q8WZ71 300 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms