RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TNFSF8P32971 234 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 S100A5P33763 92 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 HRH1P35367 487 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 FXYD4P59646 89 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 MRPS10P82664 201 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 DYRK1AQ13627 763 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 OVCH2Q7RTZ1 564 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 PDPNQ86YL7 162 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 KLHDC1Q8N7A1 406 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 GIMAP1Q8WWP7 306 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 ADTRPQ96IZ2 230 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 PLSCR3Q9NRY6 295 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 LIN7CQ9NUP9 197 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 KIAA1456Q9P272 454 aa15.62■□□□□ 0.09
SHKBP1-214ENST00000597396 GABARAPH6UMI1 98 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 NBR2O15453 112 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 CNTFRP26992 372 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 DGCR2P98153 550 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 TAGLNQ01995 201 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 CBX3Q13185 183 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 LYSMD2Q8IV50 215 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 RITA1Q96K30 269 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 SLC5A7Q9GZV3 580 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 KLK11Q9UBX7 282 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 MTFP1Q9UDX5 166 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 RBMX2Q9Y388 322 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 A3GALT2U3KPV4 340 aa15.61■□□□□ 0.09
SHKBP1-214ENST00000597396 TET2Q6N021 2002 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 DUTP33316 252 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 TSPAN5P62079 268 aa15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 RPS16P62249 146 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 SRSF4Q08170 494 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 RTL8BQ17RB0 113 aa15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 ACTBL2Q562R1 376 aa15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 TMEM17Q86X19 198 aa15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 ZNF2Q9BSG1 426 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 CCL28Q9NRJ3 127 aa15.6■□□□□ 0.09
SHKBP1-214ENST00000597396 FABP12A6NFH5 140 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 RRASP10301 218 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 KRTAP10-3P60369 221 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 DHRS11Q6UWP2 260 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 KCTD9Q7L273 389 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 SLC35E3Q7Z769 313 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 FAM71E2Q8N5Q1 922 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 BVESQ8NE79 360 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 OR6F1Q8NGZ6 308 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 FLYWCH2Q96CP2 140 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 TSNAXQ99598 290 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 RNF5Q99942 180 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 PLXNB1O43157 2135 aa15.59■□□□□ 0.09
SHKBP1-214ENST00000597396 LINC00473A8K010 186 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 CTDSPLO15194 276 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 PLGLAQ15195 96 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 RNASE10Q5GAN6 216 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 FOXB2Q5VYV0 432 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 NPBQ8NG41 125 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 SMIM4Q8WVI0 70 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 HSD17B10Q99714 261 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 PRELID3BQ9Y3B1 194 aa15.58■□□□□ 0.08
SHKBP1-214ENST00000597396 M0QYG6 137 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 RRHO14718 337 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 KCNAB3O43448 404 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 NDUFA3O95167 84 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 IGLV2-14P01704 120 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 IGHG2P01859 326 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 IGKV1-16P04430 117 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 IFNA6P05013 189 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 SSBP1Q04837 148 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 MSMO1Q15800 293 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 C5orf64Q2M2E5 130 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 ZNF660Q6AZW8 331 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 CENPVQ7Z7K6 275 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 FOXRED2Q8IWF2 684 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 ZBTB34Q8NCN2 500 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 TCTEX1D2Q8WW35 142 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 BORCS5Q969J3 196 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 MOB3AQ96BX8 217 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 CITED1Q99966 193 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 WNT10AQ9GZT5 417 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 FBXL15Q9H469 300 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 TAS2R8Q9NYW2 309 aa15.57■□□□□ 0.08
SHKBP1-214ENST00000597396 SHOXO15266 292 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 TBPP20226 339 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 TAS2R19P59542 299 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 VAX1Q5SQQ9 334 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 ZNF66Q6ZN08 573 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 TMEM229BQ8NBD8 167 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 DDB2Q92466 427 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 HARBI1Q96MB7 349 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 FXYD6Q9H0Q3 95 aa15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 METTL1Q9UBP6 276 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 ZNF107Q9UII5 783 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-214ENST00000597396 TNFSF12O43508 249 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 FCGR3BO75015 233 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 SPDEFO95238 335 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 CRYZL1O95825 349 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 HLA-DRB1P01911 266 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 CD3DP04234 171 aa15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 RPL30P62888 115 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-214ENST00000597396 TMEM177Q53S58 311 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms