RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FLVCR2Q9UPI3 526 aa9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 TBL2Q9Y4P3 447 aaKnown RBP9.76□□□□□ -0.85
SHKBP1-213ENST00000597325 IGHV1-69DA0A0B4J2H0 117 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 TEX13DA0A0J9YY54 714 aaPredicted RBP9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 LEUTXA8MZ59 168 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 BUB1B-PAK6H3BSN5 160 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 M0R1X1 148 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 NPFFO15130 113 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 TXNL1O43396 289 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 TNFSF12O43508 249 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 PEX14O75381 377 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 DHFRP00374 187 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 IGHV1-69P01742 117 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 SPNP16150 400 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 AKR1C4P17516 323 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 GNRHRP30968 328 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 ARHGDIBP52566 201 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 UBE2MP61081 183 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 RND3P61587 244 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 OXA1LQ15070 435 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 RPL39P5Q59GN2 51 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 MINOS1Q5TGZ0 78 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 SGPP2Q8IWX5 399 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 ODF3L1Q8IXM7 274 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 JMJD8Q96S16 334 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 HSD17B10Q99714 261 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 LIN7CQ9NUP9 197 aaKnown RBP9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 GAB2Q9UQC2 676 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 MINOS1-NBL1R4GNA1 71 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
SHKBP1-213ENST00000597325 DYNC2H1Q8NCM8 4307 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 IGHV3OR16-10A0A075B7F0 116 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 INMT-MINDY4F8WBC2 141 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ANXA7P20073 488 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 EPHA1P21709 976 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 VAMP1P23763 118 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 SAA4P35542 130 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF137PP52743 207 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 RAB25P57735 213 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 SCGB2A2Q13296 93 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 C4orf46Q504U0 113 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 TPTE2P1Q5T6R2 138 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 CCDC144NLQ6NUI1 221 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF66Q6ZN08 573 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF833PQ6ZTB9 187 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 KCTD9Q7L273 389 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 TBC1D26Q86UD7 250 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 TGIF2LXQ8IUE1 241 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 OR51H1Q8NH63 302 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 NANPQ8TBE9 248 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 TCTEX1D2Q8WW35 142 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 RTN4IP1Q8WWV3 396 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 RTBDNQ9BSG5 229 aaPredicted RBP9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 MARVELD1Q9BSK0 173 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 DPM3Q9P2X0 92 aa9.74□□□□□ -0.85
SHKBP1-213ENST00000597325 ARHGAP32A7KAX9 2087 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 OOSP1A8MZH6 123 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 MPPED1O15442 326 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 PRAF2O60831 178 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 IGLV2-14P01704 120 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 APOA2P02652 100 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 GAPDHP04406 335 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 IGHV4-38-2P0DP08 117 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 ANXA3P12429 323 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 REG1BP48304 166 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 THBS3P49746 956 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 RAG2P55895 527 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 BPIFB3P59826 476 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 CBX3Q13185 183 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 TMEM128Q5BJH2 165 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 RUSC1-AS1Q66K80 236 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 SLC25A42Q86VD7 318 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 C5orf30Q96GV9 206 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 MRPL20Q9BYC9 149 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 NAA60Q9H7X0 242 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 BEX1Q9HBH7 125 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 GPN1Q9HCN4 374 aaPredicted RBP9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 KCNIP3Q9Y2W7 256 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 PRELID3BQ9Y3B1 194 aa9.73□□□□□ -0.85
SHKBP1-213ENST00000597325 CRYM-AS1A6NIL9 109 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 PGLYRP1O75594 196 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 B3GALNT1O75752 331 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 AVPP01185 164 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 HLA-AP01891 365 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 MECP2P51608 486 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 UBA52P62987 128 aaKnown RBP9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF816Q0VGE8 651 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 BRD3OSQ6XYD6 125 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 LHFPL4Q7Z7J7 247 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 DRAXINQ8NBI3 349 aaPredicted RBP9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 ST6GALNAC6Q969X2 333 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 MALSU1Q96EH3 234 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 ZNF251Q9BRH9 671 aa9.72□□□□□ -0.85
SHKBP1-213ENST00000597325 MS4A7Q9GZW8 240 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms