RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 UBE2UQ5VVX9 321 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 OR8H1Q8NGG4 311 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 ZNF251Q9BRH9 671 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 ST6GALNAC5Q9BVH7 336 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 ATG5Q9H1Y0 275 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 C12orf4Q9NQ89 552 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 SLC23A1Q9UHI7 598 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 STUB1Q9UNE7 303 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 PKHD1P08F94 4074 aa11.83□□□□□ -0.52
LIG1-214ENST00000597146 RAB29O14966 203 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 NAPSAO96009 420 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 LGALS1P09382 135 aaKnown RBP11.82□□□□□ -0.52
LIG1-214ENST00000597146 PMS2P11Q13670 270 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 ZNF773Q6PK81 442 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 ANKRD13BQ86YJ7 626 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 EDARADDQ8WWZ3 215 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 HDHD3Q9BSH5 251 aaPredicted RBP11.82□□□□□ -0.52
LIG1-214ENST00000597146 PARP11Q9NR21 331 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 PIPOXQ9P0Z9 390 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 ZNF221Q9UK13 617 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 CEPT1Q9Y6K0 416 aa11.82□□□□□ -0.52
LIG1-214ENST00000597146 SMIM30A4D0T7 59 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 TRDCB7Z8K6 153 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 H7C2Y5 167 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 ST8SIA5O15466 376 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 OR3A3P47888 321 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 ZNF137PP52743 207 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 TMEM50BP56557 158 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 NEDD8Q15843 81 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 LY6G6FQ5SQ64 297 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 CD200R1LQ6Q8B3 271 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 OR10R2Q8NGX6 335 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 CYYR1Q96J86 154 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 CHCHD6Q9BRQ6 235 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 Q9N2K0 584 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 VCX3AQ9NNX9 186 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 TXNL4BQ9NX01 149 aaKnown RBP11.81□□□□□ -0.52
LIG1-214ENST00000597146 RNF150Q9ULK6 438 aa11.81□□□□□ -0.52
LIG1-214ENST00000597146 TRBV6-6A0A0A6YYG2 114 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 LOC100506127A0A0U1RQW1 187 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 GSTP1P09211 210 aaKnown RBP11.8□□□□□ -0.52
LIG1-214ENST00000597146 SCTP09683 121 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 RAB6AP20340 208 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 HLA-DRB3P79483 266 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 ARL6IP1Q15041 203 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 MMDQ15546 238 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 ZNF880Q6PDB4 577 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 TPRA1Q86W33 373 aa11.8□□□□□ -0.52
LIG1-214ENST00000597146 THAP7Q9BT49 309 aaPredicted RBP11.8□□□□□ -0.52
LIG1-214ENST00000597146 RBM7Q9Y580 266 aaKnown RBP11.8□□□□□ -0.52
LIG1-214ENST00000597146 TRAV41A0A0B4J266 112 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 NOTOA8MTQ0 251 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 SOX15O60248 233 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 GNB3P16520 340 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 FGF9P31371 208 aaPredicted RBP11.79□□□□□ -0.52
LIG1-214ENST00000597146 MC5RP33032 325 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 LSAMPQ13449 338 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 PLGLAQ15195 96 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 ELOVL1Q9BW60 279 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
LIG1-214ENST00000597146 PLEKHA3Q9HB20 300 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 DAPK2Q9UIK4 370 aa11.79□□□□□ -0.52
LIG1-214ENST00000597146 SAA2-SAA4A0A096LPE2 208 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 A0A0B4J203 849 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 BET1O15155 118 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 SAA2P0DJI9 122 aaPredicted RBP11.78□□□□□ -0.52
LIG1-214ENST00000597146 SNRPBP14678 240 aaKnown RBP11.78□□□□□ -0.52
LIG1-214ENST00000597146 SERPINB10P48595 397 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 ACTBP60709 375 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 MXD1Q05195 221 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 ECSCRQ19T08 205 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 LINC00322Q6ZN03 302 aaPredicted RBP11.78□□□□□ -0.52
LIG1-214ENST00000597146 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 OR10J5Q8NHC4 309 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 ABHD14BQ96IU4 210 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 GINS4Q9BRT9 223 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 CENPOQ9BU64 300 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 C11orf54Q9H0W9 315 aaPredicted RBP11.78□□□□□ -0.52
LIG1-214ENST00000597146 OR51E2Q9H255 320 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
LIG1-214ENST00000597146 DYNC1H1Q14204 4646 aaKnown RBP11.78□□□□□ -0.52
LIG1-214ENST00000597146 DNAH6Q9C0G6 4158 aa11.77□□□□□ -0.52
LIG1-214ENST00000597146 IGHV7-81A0A0B4J1V7 117 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 SHISA3A0PJX4 238 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 FABP7O15540 132 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 CD36P16671 472 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 PLA2G7Q13093 441 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 CDNFQ49AH0 187 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 KCTD21Q4G0X4 260 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 RPL39P5Q59GN2 51 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 LIN54Q6MZP7 749 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 MINDY2Q8NBR6 621 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 OR4A4PQ8NGN8 299 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 PTX4Q96A99 478 aa11.77□□□□□ -0.53
LIG1-214ENST00000597146 A0A1W2PN81 502 aa11.76□□□□□ -0.53
LIG1-214ENST00000597146 FOXI3A8MTJ6 420 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms