RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 PPP1CCP36873 323 aaKnown RBP5.4□□□□□ -1.54
LINC00343-204ENST00000596398 LGALS7P47929 136 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 RHOGP84095 191 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 RIPK1Q13546 671 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 ALKBH1Q13686 389 aaKnown RBP5.4□□□□□ -1.54
LINC00343-204ENST00000596398 MAPRE2Q15555 327 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 PXDC1Q5TGL8 231 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 C8orf82Q6P1X6 216 aaPredicted RBP5.4□□□□□ -1.54
LINC00343-204ENST00000596398 ZNF497Q6ZNH5 498 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 APRG1Q8IVJ8 170 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 UBE2DNLQ8IWF7 75 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 SLC35F2Q8IXU6 374 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 OR4K15Q8NH41 348 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 ANP32BQ92688 251 aaKnown RBP5.4□□□□□ -1.54
LINC00343-204ENST00000596398 GHSRQ92847 366 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 C10orf35Q96D05 121 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 CNN2Q99439 309 aaKnown RBP5.4□□□□□ -1.54
LINC00343-204ENST00000596398 ARPC5LQ9BPX5 153 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 CSTL1Q9H114 145 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 MDFICQ9P1T7 246 aa5.4□□□□□ -1.54
LINC00343-204ENST00000596398 RCC2Q9P258 522 aaKnown RBP5.4□□□□□ -1.54
LINC00343-204ENST00000596398 DEFB131BA0A096LNP1 70 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 ZNF320A2RRD8 509 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 MPTX1A8MV57 137 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 FAM90A23PA8MXZ1 464 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 H3BNX3 289 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 SLC22A1O15245 554 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 SPINT2O43291 252 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 OR7C1O76099 320 aaPredicted RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 IFNA21P01568 189 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 IFNA17P01571 189 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 CD74P04233 296 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 CT45A6P0DMU7 189 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 CT45A5P0DMU8 189 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 CT45A7P0DMV0 189 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 DBTP11182 482 aaKnown RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 RCC1P18754 421 aaPredicted RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 ACTR3P61158 418 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 IL13RA2Q14627 380 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 MED22Q15528 200 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 KISS1Q15726 138 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 RPL39P5Q59GN2 51 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 SYT6Q5T7P8 510 aaPredicted RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 TMEM236Q5W0B7 351 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 LPCAT4Q643R3 524 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 ELP2Q6IA86 826 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 RBPMS2Q6ZRY4 209 aaKnown RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 BCDIN3DQ7Z5W3 292 aaKnown RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 SLC38A6Q8IZM9 456 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 Q8NAQ8 132 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 CD300LFQ8TDQ1 290 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 NEK7Q8TDX7 302 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 FAM46BQ96A09 425 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 GALNT14Q96FL9 552 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 CYYR1Q96J86 154 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 TBX5Q99593 518 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 HOPXQ9BPY8 73 aaPredicted RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 NDUFAF3Q9BU61 184 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 HRH4Q9H3N8 390 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 OR2S2Q9NQN1 319 aa5.39□□□□□ -1.55
LINC00343-204ENST00000596398 V9GYY5 206 aaPredicted RBP5.39□□□□□ -1.55
LINC00343-204ENST00000596398 H0YJW9 148 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 GEMIN2O14893 280 aaKnown RBP5.38□□□□□ -1.55
LINC00343-204ENST00000596398 IGHV3-23P01764 117 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 MT-ND2P03891 347 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 IGKV1-16P04430 117 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 IL6RP08887 468 aaPredicted RBP5.38□□□□□ -1.55
LINC00343-204ENST00000596398 SCTP09683 121 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 ATP5G2Q06055 141 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 TMEM30BQ3MIR4 351 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 ATAD3CQ5T2N8 411 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 LYPD1Q8N2G4 141 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 ADAD2Q8NCV1 583 aaKnown RBP5.38□□□□□ -1.55
LINC00343-204ENST00000596398 CCDC54Q8NEL0 328 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 OR51A4Q8NGJ6 313 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 FEVQ99581 238 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 GORASP2Q9H8Y8 452 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 ADGRL4Q9HBW9 690 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 TRAPPC2LQ9UL33 140 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 ST3GAL6Q9Y274 331 aa5.38□□□□□ -1.55
LINC00343-204ENST00000596398 LRP1Q07954 4544 aaKnown RBP5.38□□□□□ -1.55
LINC00343-204ENST00000596398 TRAV25A0A0B4J276 109 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 IGHV4-28A0A0C4DH34 117 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 ZNF670-ZNF695F2Z2N8 137 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 SULT1B1O43704 296 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 GGCTO75223 188 aaKnown RBP5.37□□□□□ -1.55
LINC00343-204ENST00000596398 GMNNO75496 209 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 TUSC2O75896 110 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 HMGN1P05114 100 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 KRT8P05787 483 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 UBCP0CG48 685 aaKnown RBP5.37□□□□□ -1.55
LINC00343-204ENST00000596398 T-ENOLP0DO92 83 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 XGP55808 180 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 CDK5Q00535 292 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 RSU1Q15404 277 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 ZNF585BQ52M93 769 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 C6orf141Q5SZD1 244 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 ZNF691Q5VV52 312 aa5.37□□□□□ -1.55
LINC00343-204ENST00000596398 WDR93Q6P2C0 686 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms