RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CAPSLQ8WWF8 208 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 JMJD8Q96S16 334 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 S1PR3Q99500 378 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 RSRP1Q9BUV0 290 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 HRASLSQ9HDD0 168 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 ZNF221Q9UK13 617 aa8.41□□□□□ -1.06
LIG1-210ENST00000596332 TMEM89A2RUT3 159 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 SH2D7A6NKC9 451 aaPredicted RBP8.4□□□□□ -1.06
LIG1-210ENST00000596332 LINC01548A6NM66 108 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 M0R1X1 148 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 PLA2G10O15496 165 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 OR2F2O95006 317 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 CRYGBP07316 175 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 HKR1P10072 659 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 TAS2R19P59542 299 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 KRTAP10-3P60369 221 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 HNF4GQ14541 408 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 SPANXN2Q5MJ10 180 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 C11orf88Q6PI97 169 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 ARRDC1Q8N5I2 433 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 FAM71E2Q8N5Q1 922 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 GDPD1Q8N9F7 314 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 Q8N9W7 124 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 NPBQ8NG41 125 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 OR6F1Q8NGZ6 308 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 SECTM1Q8WVN6 248 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 SLC5A7Q9GZV3 580 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 C16orf95Q9H693 158 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 ZNF702PQ9H963 129 aa8.4□□□□□ -1.06
LIG1-210ENST00000596332 PGLYRP1O75594 196 aaPredicted RBP8.39□□□□□ -1.07
LIG1-210ENST00000596332 NDUFA3O95167 84 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 NDUFA7O95182 113 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 MOSP00540 346 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 CSF1P09603 554 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 FAM106CPP0CH98 169 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 AKAIN1P0CW23 69 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 VSIG10L2P0DP72 767 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 IL7P13232 177 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 BTCP35070 178 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 FXYD4P59646 89 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 RPL15P61313 204 aaKnown RBP8.39□□□□□ -1.07
LIG1-210ENST00000596332 SSBP2P81877 361 aaPredicted RBP8.39□□□□□ -1.07
LIG1-210ENST00000596332 ZNF585BQ52M93 769 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 TMEM177Q53S58 311 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 ACTBL2Q562R1 376 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 RNASE10Q5GAN6 216 aaKnown RBP8.39□□□□□ -1.07
LIG1-210ENST00000596332 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 C5orf56Q8N8D9 126 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 OR2T10Q8NGZ9 312 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 TERB2Q8NHR7 220 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 LINC01006Q8NI28 216 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
LIG1-210ENST00000596332 RTBDNQ9BSG5 229 aaPredicted RBP8.39□□□□□ -1.07
LIG1-210ENST00000596332 SLC25A33Q9BSK2 321 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 C19orf24Q9BVV8 132 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 ABCB10Q9NRK6 738 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 SLC2A8Q9NY64 477 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 GPR132Q9UNW8 380 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 SIGLEC9Q9Y336 463 aa8.39□□□□□ -1.07
LIG1-210ENST00000596332 FCN1O00602 326 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 TNFSF12O43508 249 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 SLC22A5O76082 557 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 IL6RP08887 468 aaPredicted RBP8.38□□□□□ -1.07
LIG1-210ENST00000596332 TMEM11P17152 192 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 MC5RP33032 325 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 THBS3P49746 956 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 COMPP49747 757 aaPredicted RBP8.38□□□□□ -1.07
LIG1-210ENST00000596332 PPP5CP53041 499 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 TMEM17Q86X19 198 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 ZBTB34Q8NCN2 500 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 OR51S1Q8NGJ8 323 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 PPP1R14BQ96C90 147 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 AKR1E2Q96JD6 320 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 SERTAD4Q9NUC0 356 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 TAS2R8Q9NYW2 309 aa8.38□□□□□ -1.07
LIG1-210ENST00000596332 RAMP3O60896 148 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 PI3P19957 117 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 MDKP21741 143 aaPredicted RBP8.37□□□□□ -1.07
LIG1-210ENST00000596332 TSPAN5P62079 268 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 MEF2DQ14814 521 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 PSG5Q15238 335 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 ZNF66Q6ZN08 573 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 C16orf82Q7Z2V1 217 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 MARCH1Q8TCQ1 289 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 HSD17B10Q99714 261 aaKnown RBP8.37□□□□□ -1.07
LIG1-210ENST00000596332 RNF5Q99942 180 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 WNT10AQ9GZT5 417 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 C5orf66Q9H5L9 145 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 TPSG1Q9NRR2 321 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 SLC35D1Q9NTN3 355 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 PITPNC1Q9UKF7 332 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 WASHC3Q9Y3C0 194 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 RBM7Q9Y580 266 aaKnown RBP8.37□□□□□ -1.07
LIG1-210ENST00000596332 MMP24Q9Y5R2 645 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
LIG1-210ENST00000596332 STAB1Q9NY15 2570 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 GPR31O00270 319 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 FGF16O43320 207 aa8.36□□□□□ -1.07
LIG1-210ENST00000596332 IGKV1-39P01597 117 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms