RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TCTEX1D1Q8N7M0 179 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 NPBQ8NG41 125 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 PTX4Q96A99 478 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 OR4C12Q96R67 309 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 TOLLIPQ9H0E2 274 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 FBXL15Q9H469 300 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 MGAT4AQ9UM21 535 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 FBXO7Q9Y3I1 522 aa11.38□□□□□ -0.59
PNKP-202ENST00000593706 SOX15O60248 233 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 PROP1O75360 226 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 IGHV3-11P01762 117 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 HIST1H1DP16402 221 aaKnown RBP11.37□□□□□ -0.59
PNKP-202ENST00000593706 ZFAND6Q6FIF0 208 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 PYHIN1Q6K0P9 492 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 ACSM6Q6P461 480 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 OR10R2Q8NGX6 335 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 SETD6Q8TBK2 473 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 RAB3CQ96E17 227 aa11.37□□□□□ -0.59
PNKP-202ENST00000593706 CMSS1Q9BQ75 279 aaKnown RBP11.37□□□□□ -0.59
PNKP-202ENST00000593706 SMIM30A4D0T7 59 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 NOTOA8MTQ0 251 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 TRDCB7Z8K6 153 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 H7C2Y5 167 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 RRHO14718 337 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 RAB29O14966 203 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 FCGR3AP08637 254 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 CD40LGP29965 261 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 TPPP2P59282 170 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 TMEM267Q0VDI3 215 aaPredicted RBP11.36□□□□□ -0.59
PNKP-202ENST00000593706 ACTBL2Q562R1 376 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 RPL39P5Q59GN2 51 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 C19orf54Q5BKX5 351 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 ZNF660Q6AZW8 331 aaPredicted RBP11.36□□□□□ -0.59
PNKP-202ENST00000593706 ISOC1Q96CN7 298 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 RSRP1Q9BUV0 290 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 C11orf54Q9H0W9 315 aaPredicted RBP11.36□□□□□ -0.59
PNKP-202ENST00000593706 OR51E2Q9H255 320 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 GAR1Q9NY12 217 aaKnown RBP11.36□□□□□ -0.59
PNKP-202ENST00000593706 PIPOXQ9P0Z9 390 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 RNF150Q9ULK6 438 aa11.36□□□□□ -0.59
PNKP-202ENST00000593706 LCE6AA0A183 80 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 OR5H14A6NHG9 310 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 DIRAS3O95661 229 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 GSTP1P09211 210 aaKnown RBP11.35□□□□□ -0.59
PNKP-202ENST00000593706 GNB3P16520 340 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 ZBTB25P24278 435 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 CRIP2P52943 208 aaPredicted RBP11.35□□□□□ -0.59
PNKP-202ENST00000593706 CX3CL1P78423 397 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 HAPLN4Q86UW8 402 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 TPRA1Q86W33 373 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 PPP1R27Q86WC6 154 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 OR5AN1Q8NGI8 311 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 FLYWCH2Q96CP2 140 aaKnown RBP11.35□□□□□ -0.59
PNKP-202ENST00000593706 ABHD14BQ96IU4 210 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 MS4A10Q96PG2 267 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 ELOVL1Q9BW60 279 aa11.35□□□□□ -0.59
PNKP-202ENST00000593706 H0YJW9 148 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 FABP7O15540 132 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 HSPB1P04792 205 aaKnown RBP11.34□□□□□ -0.59
PNKP-202ENST00000593706 GADD45AP24522 165 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 CEACAM6P40199 344 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 SFXN4Q6P4A7 337 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 GLDNQ6ZMI3 551 aaPredicted RBP11.34□□□□□ -0.59
PNKP-202ENST00000593706 Q6ZS49 121 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 ANKRD13BQ86YJ7 626 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 OR4A4PQ8NGN8 299 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 EDARADDQ8WWZ3 215 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 TM2D3Q9BRN9 247 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 FAM103A1Q9BTL3 118 aaKnown RBP11.34□□□□□ -0.59
PNKP-202ENST00000593706 RNF167Q9H6Y7 350 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 WASHC3Q9Y3C0 194 aa11.34□□□□□ -0.59
PNKP-202ENST00000593706 HSPA12AO43301 675 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 CD3GP09693 182 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 IGHV4-30-4P0DP06 118 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 MC5RP33032 325 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 SDC2P34741 201 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 NEDD8Q15843 81 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 IGSF11Q5DX21 431 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 SGPP2Q8IWX5 399 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 C5orf30Q96GV9 206 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 SLA2Q9H6Q3 261 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 RDH8Q9NYR8 311 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
PNKP-202ENST00000593706 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
PNKP-202ENST00000593706 ELF5Q9UKW6 265 aaPredicted RBP11.33□□□□□ -0.6
PNKP-202ENST00000593706 SSR3Q9UNL2 185 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 GAB2Q9UQC2 676 aa11.33□□□□□ -0.6
PNKP-202ENST00000593706 HYDINQ4G0P3 5121 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 IGKV1D-8A0A087WSZ0 117 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
PNKP-202ENST00000593706 METTL21EPA6NDL7 271 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms