RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TM2D3Q9BRN9 247 aa18.34■□□□□ 0.53
LSM4-202ENST00000593564 IGHV4-30-4P0DP06 118 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 SSBP2P81877 361 aaPredicted RBP18.33■□□□□ 0.52
LSM4-202ENST00000593564 IRF3Q14653 427 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 RAB11BQ15907 218 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 TMEM91Q6ZNR0 172 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 ANKRD13BQ86YJ7 626 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 CMSS1Q9BQ75 279 aaKnown RBP18.33■□□□□ 0.52
LSM4-202ENST00000593564 PECRQ9BY49 303 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 VCXQ9H320 206 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 ZNF355PQ9NSJ1 428 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 RDH8Q9NYR8 311 aa18.33■□□□□ 0.52
LSM4-202ENST00000593564 A0A0G2JLM5 398 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 C13orf42A0A1B0GVH6 325 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 A8MZ25 164 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 TRDCB7Z8K6 153 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 M0R1X1 148 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 LDLRAD4O15165 306 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 VEGFCP49767 419 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 MOGAT2Q3SYC2 334 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 RSRP1Q9BUV0 290 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 SLC35D1Q9NTN3 355 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 SCN3BQ9NY72 215 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 AK6Q9Y3D8 172 aaKnown RBP18.32■□□□□ 0.52
LSM4-202ENST00000593564 STARD9Q9P2P6 4700 aa18.32■□□□□ 0.52
LSM4-202ENST00000593564 ARL6IP5O75915 188 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 IGLV2-23P01705 113 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 SERPINB10P48595 397 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 TPBGQ13641 420 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 OR5T1Q8NG75 326 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 OR56B1Q8NGI3 324 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 PALMDQ9NP74 551 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 C19orf73Q9NVV2 129 aa18.31■□□□□ 0.52
LSM4-202ENST00000593564 CNIH1O95406 144 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 CRYGBP07316 175 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 LGALS7P47929 136 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 KLF5Q13887 457 aaPredicted RBP18.3■□□□□ 0.52
LSM4-202ENST00000593564 TRAM1Q15629 374 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 PLAC9Q5JTB6 97 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 SGPP2Q8IWX5 399 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 OR4A4PQ8NGN8 299 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 TMEM68Q96MH6 324 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 DNAH1Q9P2D7 4330 aa18.3■□□□□ 0.52
LSM4-202ENST00000593564 BRI3O95415 125 aa18.29■□□□□ 0.52
LSM4-202ENST00000593564 PSMA1P25786 263 aaKnown RBP18.29■□□□□ 0.52
LSM4-202ENST00000593564 CLDN12P56749 244 aa18.29■□□□□ 0.52
LSM4-202ENST00000593564 RPS25P62851 125 aaKnown RBP18.29■□□□□ 0.52
LSM4-202ENST00000593564 PJVKQ0ZLH3 352 aa18.29■□□□□ 0.52
LSM4-202ENST00000593564 FAM3DQ96BQ1 224 aa18.29■□□□□ 0.52
LSM4-202ENST00000593564 FABP7O15540 132 aa18.28■□□□□ 0.52
LSM4-202ENST00000593564 RANBP1P43487 201 aa18.28■□□□□ 0.52
LSM4-202ENST00000593564 OR9G4Q8NGQ1 327 aa18.28■□□□□ 0.52
LSM4-202ENST00000593564 ANKRD34BA5PLL1 514 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 HSMCR30P0CW71 290 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 AADACP22760 399 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 TAGLNQ01995 201 aaKnown RBP18.27■□□□□ 0.52
LSM4-202ENST00000593564 C2orf76Q3KRA6 126 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 IL34Q6ZMJ4 242 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 HARBI1Q96MB7 349 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 CABLES2Q9BTV7 478 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 TINAGL1Q9GZM7 467 aaPredicted RBP18.27■□□□□ 0.52
LSM4-202ENST00000593564 OR2D2Q9H210 308 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 SDHAF2Q9NX18 166 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 KCNK7Q9Y2U2 307 aa18.27■□□□□ 0.52
LSM4-202ENST00000593564 EPPK1P58107 5090 aaKnown RBP18.27■□□□□ 0.51
LSM4-202ENST00000593564 DENRO43583 198 aaKnown RBP18.26■□□□□ 0.51
LSM4-202ENST00000593564 DIRAS3O95661 229 aa18.26■□□□□ 0.51
LSM4-202ENST00000593564 CD3GP09693 182 aa18.26■□□□□ 0.51
LSM4-202ENST00000593564 CALRP27797 417 aaKnown RBP18.26■□□□□ 0.51
LSM4-202ENST00000593564 MRPS15P82914 257 aaKnown RBP18.26■□□□□ 0.51
LSM4-202ENST00000593564 DUSP21Q9H596 190 aa18.26■□□□□ 0.51
LSM4-202ENST00000593564 EDA2RQ9HAV5 297 aa18.26■□□□□ 0.51
LSM4-202ENST00000593564 TPRKBQ9Y3C4 175 aa18.26■□□□□ 0.51
LSM4-202ENST00000593564 CSMD3Q7Z407 3707 aa18.26■□□□□ 0.51
LSM4-202ENST00000593564 LYSTQ99698 3801 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 LCE6AA0A183 80 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 TMEM272A0A1B0GTI8 110 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 H0Y980 276 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 BET1O15155 118 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 FCGR3AP08637 254 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 SYNJ2BPP57105 145 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 MLLT11Q13015 90 aaPredicted RBP18.25■□□□□ 0.51
LSM4-202ENST00000593564 CBX3Q13185 183 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 TMEM177Q53S58 311 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 IGSF11Q5DX21 431 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 ZNF343Q6P1L6 599 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 OR10J5Q8NHC4 309 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 ISOC1Q96CN7 298 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 C5orf30Q96GV9 206 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 PEF1Q9UBV8 284 aaKnown RBP18.25■□□□□ 0.51
LSM4-202ENST00000593564 RAB22AQ9UL26 194 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 V9GY05 133 aa18.25■□□□□ 0.51
LSM4-202ENST00000593564 TRBV6-7A0A0A0MS04 114 aa18.24■□□□□ 0.51
LSM4-202ENST00000593564 PSMD7P51665 324 aa18.24■□□□□ 0.51
LSM4-202ENST00000593564 PLA2G7Q13093 441 aa18.24■□□□□ 0.51
LSM4-202ENST00000593564 ZFAND6Q6FIF0 208 aa18.24■□□□□ 0.51
LSM4-202ENST00000593564 RAB3CQ96E17 227 aa18.24■□□□□ 0.51
LSM4-202ENST00000593564 USMG5Q96IX5 58 aa18.24■□□□□ 0.51
LSM4-202ENST00000593564 SRRM4A7MD48 611 aaKnown RBP18.23■□□□□ 0.51
LSM4-202ENST00000593564 SHOXO15266 292 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms