RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 ZNF439Q8NDP4 499 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 CT45A3Q8NHU0 189 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 ZNF714Q96N38 554 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 WFDC1Q9HC57 220 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 CBLN4Q9NTU7 201 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 CTSZQ9UBR2 303 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 PRELID3BQ9Y3B1 194 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 SESN1Q9Y6P5 492 aa9.84□□□□□ -0.83
NPC1-214ENST00000593280 SAA2-SAA4A0A096LPE2 208 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 I3L521 148 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 DVL1O14640 695 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 RAB29O14966 203 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 FCGR3BO75015 233 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 PROP1O75360 226 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 FCN3O75636 299 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 MMP23AO75900 390 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 TMEM50AO95807 157 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 SAA2P0DJI9 122 aaPredicted RBP9.83□□□□□ -0.84
NPC1-214ENST00000593280 DAOP14920 347 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 PAX9P55771 341 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 LINC00205P59089 165 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 TOR2AQ5JU69 321 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 H2BFWTQ7Z2G1 175 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 STX12Q86Y82 276 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 LYG1Q8N1E2 194 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 REG4Q9BYZ8 158 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 RAB1BQ9H0U4 201 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 ARV1Q9H2C2 271 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 BARX1Q9HBU1 254 aaPredicted RBP9.83□□□□□ -0.84
NPC1-214ENST00000593280 WSB1Q9Y6I7 421 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 NBASA2RRP1 2371 aa9.83□□□□□ -0.84
NPC1-214ENST00000593280 IGSF10Q6WRI0 2623 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 ARID1AO14497 2285 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 MARCH11A6NNE9 402 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 LYNX1G3V0Z9 82 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 TEX46H3BTG2 121 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 RBFOX2O43251 390 aaKnown RBP eCLIP9.82□□□□□ -0.84
NPC1-214ENST00000593280 MED6O75586 246 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 HPRT1P00492 218 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 LYNX1P0DP58 116 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 IAPPP10997 89 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 COL8A2P25067 703 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 MRPS11P82912 194 aaKnown RBP9.82□□□□□ -0.84
NPC1-214ENST00000593280 ZNF266Q14584 549 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 TMEM200BQ69YZ2 307 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 R3HDM4Q96D70 268 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 S1PR3Q99500 378 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 H3BP45 60 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 TXNL1O43396 289 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 FBXO24O75426 580 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 CST7O76096 145 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 FSTL3O95633 263 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 CCL3L1P16619 93 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 THBS3P49746 956 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 TNFRSF9Q07011 255 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 CLINT1Q14677 625 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 MIDNQ504T8 468 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 C11orf71Q6IPW1 123 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 HEPN1Q6WQI6 88 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 SLC25A48Q6ZT89 311 aaKnown RBP9.82□□□□□ -0.84
NPC1-214ENST00000593280 HSD17B13Q7Z5P4 300 aaPredicted RBP9.82□□□□□ -0.84
NPC1-214ENST00000593280 ODF3L1Q8IXM7 274 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 ZNF295-AS1Q8N0V1 137 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 OR4S2Q8NH73 311 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 RAB39BQ96DA2 213 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 ADTRPQ96IZ2 230 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 GINS3Q9BRX5 216 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.82□□□□□ -0.84
NPC1-214ENST00000593280 PSENENQ9NZ42 101 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 HSPB7Q9UBY9 170 aa9.82□□□□□ -0.84
NPC1-214ENST00000593280 FASNP49327 2511 aaKnown RBP9.81□□□□□ -0.84
NPC1-214ENST00000593280 ZNF705EA8MWA4 302 aaPredicted RBP9.81□□□□□ -0.84
NPC1-214ENST00000593280 IGHV2-70P01814 119 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 FAM157CP0CG43 387 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 SULT1A1P50225 295 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 SULT1A2P50226 295 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 DYNLT3P51808 116 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 TAS2R30P59541 319 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 UBE2KP61086 200 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 ERVK-16P61578 105 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 TMEM267Q0VDI3 215 aaPredicted RBP9.81□□□□□ -0.84
NPC1-214ENST00000593280 OR5C1Q8NGR4 320 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 DDB2Q92466 427 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 MARVELD3Q96A59 401 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 SMIM8Q96KF7 97 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 RBKSQ9H477 322 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 YLPM1P49750 1951 aaKnown RBP9.81□□□□□ -0.84
NPC1-214ENST00000593280 CFAP46Q8IYW2 2715 aa9.81□□□□□ -0.84
NPC1-214ENST00000593280 DIDO1Q9BTC0 2240 aaKnown RBP9.8□□□□□ -0.84
NPC1-214ENST00000593280 TRBV23-1A0A0A0MS06 115 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 FAM90A9PA6NNJ1 464 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 RBMXL2O75526 392 aaKnown RBP9.8□□□□□ -0.84
NPC1-214ENST00000593280 SOD3P08294 240 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 FGF2P09038 288 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 SEC11BP0C7V7 166 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 C1orf229Q6ZS94 237 aaPredicted RBP9.8□□□□□ -0.84
NPC1-214ENST00000593280 EIF4E3Q8N5X7 224 aaKnown RBP9.8□□□□□ -0.84
NPC1-214ENST00000593280 TMEM217Q8N7C4 229 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 HSD17B11Q8NBQ5 300 aa9.8□□□□□ -0.84
NPC1-214ENST00000593280 OR1S2Q8NGQ3 325 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms