RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	SAMD5	Q5TGI4	173 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	ZNF660	Q6AZW8	331 aa	Predicted RBP	12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	GVQW1	Q8N7I0	195 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	BEST4	Q8NFU0	473 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	KCTD12	Q96CX2	325 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	SLC35D1	Q9NTN3	355 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	METTL1	Q9UBP6	276 aa	Known RBP	12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	WSB1	Q9Y6I7	421 aa		12.86	□□□□□ -0.35
CIRBP-233	ENST00000591622	NUDT19	A8MXV4	375 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622		G3V318	75 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	SPDEF	O95238	335 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	HLA-DQB1	P01920	261 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	RPLP1	P05386	114 aa	Known RBP	12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	PTHLH	P12272	177 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	CD33	P20138	364 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	PPIF	P30405	207 aa	Known RBP	12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	LUM	P51884	338 aa	Predicted RBP	12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	CX3CL1	P78423	397 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	LCNL1	Q6ZST4	164 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	C18orf65	Q6ZTR6	163 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	HOGA1	Q86XE5	327 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	ANKRD13B	Q86YJ7	626 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	ZNF695	Q8IW36	515 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	KLHL30-AS1	Q8NEE0	82 aa		12.85	□□□□□ -0.35
CIRBP-233	ENST00000591622	NOTCH1	P46531	2555 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	TRAV41	A0A0B4J266	112 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622		J3QRK9	145 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	WIPF1	O43516	503 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	PSMB8	P28062	276 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	DUT	P33316	252 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	CBX5	P45973	191 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	LGALS7	P47929	136 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	ARPC4	P59998	168 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	CTF1	Q16619	201 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	BEAN1	Q3B7T3	259 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	OXLD1	Q5BKU9	147 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	TMEM69	Q5SWH9	247 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	C8orf86	Q6ZUL3	223 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	ZNF645	Q8N7E2	425 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	BVES	Q8NE79	360 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	DDB2	Q92466	427 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	ADTRP	Q96IZ2	230 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	MRPS26	Q9BYN8	205 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	NAA50	Q9GZZ1	169 aa	Known RBP	12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	FBXO7	Q9Y3I1	522 aa		12.84	□□□□□ -0.35
CIRBP-233	ENST00000591622	TUSC2	O75896	110 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	SLC22A5	O76082	557 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	GABARAP	O95166	117 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	IGLV1-40	P01703	118 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	RRAS	P10301	218 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	CDX1	P47902	265 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	CRIP2	P52943	208 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	NDP	Q00604	133 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	CBX3	Q13185	183 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	RTL8B	Q17RB0	113 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	TMEM177	Q53S58	311 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	KPRP	Q5T749	579 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	ZNF562	Q6V9R5	426 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	ETV3L	Q6ZN32	361 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	MINDY2	Q8NBR6	621 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	CLCC1	Q96S66	551 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	COMMD3	Q9UBI1	195 aa		12.83	□□□□□ -0.36
CIRBP-233	ENST00000591622	IGKV1D-13	A0A0B4J2D9	117 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	LINC00473	A8K010	186 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	SLC25A17	O43808	307 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	IGLV2-23	P01705	113 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	IGKV1-13	P0DP09	117 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	EGR2	P11161	476 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	TAS2R20	P59543	309 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	C19orf54	Q5BKX5	351 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	GPR107	Q5VW38	600 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	TMEM65	Q6PI78	240 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	PPP1R27	Q86WC6	154 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	LINC00482	Q8N8I6	264 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	ACOT12	Q8WYK0	555 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	SNAPC3	Q92966	411 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	HARBI1	Q96MB7	349 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	CMTM3	Q96MX0	182 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	NECAP2	Q9NVZ3	263 aa		12.82	□□□□□ -0.36
CIRBP-233	ENST00000591622	MEIS3P1	A6NDR6	274 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	SHOX	O15266	292 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	CA2	P00918	260 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	IGLV2-14	P01704	120 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	APOA1	P02647	267 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	EIF4E	P06730	217 aa	Known RBP	12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	FCER2	P06734	321 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	IGLL1	P15814	213 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	FCGR2C	P31995	323 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	MYCNOS	P40205	109 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	ALDH3B2	P48448	385 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	RORC	P51449	518 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	ECSCR	Q19T08	205 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	MRPL41	Q8IXM3	137 aa	Known RBP	12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	OR5AP2	Q8NGF4	316 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	MYOZ3	Q8TDC0	251 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	ABHD5	Q8WTS1	349 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	P2RX4	Q99571	388 aa		12.81	□□□□□ -0.36
CIRBP-233	ENST00000591622	KLK15	Q9H2R5	256 aa		12.81	□□□□□ -0.36

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