RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CROCCP3Q8IVE0 287 aa14.26□□□□□ -0.13
DDX39A-212ENST00000590260 WFDC9Q8NEX5 89 aa14.26□□□□□ -0.13
DDX39A-212ENST00000590260 GINS4Q9BRT9 223 aa14.26□□□□□ -0.13
DDX39A-212ENST00000590260 MEIS3P1A6NDR6 274 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 XRCC3O43542 346 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 RBBP9O75884 186 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 IGHG4P01861 327 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 FCER2P06734 321 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 CRYGBP07316 175 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 PSMB8P28062 276 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 DUTP33316 252 aaKnown RBP14.25□□□□□ -0.13
DDX39A-212ENST00000590260 EIF4EBP1Q13541 118 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-212ENST00000590260 KIAA0141Q14154 515 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-212ENST00000590260 MRGPRG-AS1Q2M3A8 158 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 OXLD1Q5BKU9 147 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 KHDC1LQ5JSQ8 128 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 UBE2NLQ5JXB2 153 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 KPRPQ5T749 579 aaPredicted RBP14.25□□□□□ -0.13
DDX39A-212ENST00000590260 C8orf86Q6ZUL3 223 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 PDPNQ86YL7 162 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 SAMD12Q8N8I0 201 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 MYOZ3Q8TDC0 251 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 SLC35D1Q9NTN3 355 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 OR2W1Q9Y3N9 320 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 WSB1Q9Y6I7 421 aa14.25□□□□□ -0.13
DDX39A-212ENST00000590260 SRRM4A7MD48 611 aaKnown RBP14.24□□□□□ -0.13
DDX39A-212ENST00000590260 SOX15O60248 233 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 CRIP2P52943 208 aaPredicted RBP14.24□□□□□ -0.13
DDX39A-212ENST00000590260 SLC35B1P78383 322 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 CX3CL1P78423 397 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 TEX38Q6PEX7 206 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 COMMD1Q8N668 190 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 BVESQ8NE79 360 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 BEST4Q8NFU0 473 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 RNF5Q99942 180 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 KLK15Q9H2R5 256 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 PARP11Q9NR21 331 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 DIABLOQ9NR28 239 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 KIAA1456Q9P272 454 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 ANAPC10Q9UM13 185 aa14.24□□□□□ -0.13
DDX39A-212ENST00000590260 ARPC1BO15143 372 aaKnown RBP14.23□□□□□ -0.13
DDX39A-212ENST00000590260 IGLV1-40P01703 118 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 CTXN2P0C2S0 81 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 PF4V1P10720 104 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 TAS2R20P59543 309 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 RPL30P62888 115 aaKnown RBP14.23□□□□□ -0.13
DDX39A-212ENST00000590260 FOXE3Q13461 319 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 GPR107Q5VW38 600 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 LINC00482Q8N8I6 264 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 MINDY2Q8NBR6 621 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 CLCC1Q96S66 551 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 MRPS26Q9BYN8 205 aaKnown RBP14.23□□□□□ -0.13
DDX39A-212ENST00000590260 ZFP57Q9NU63 452 aa14.23□□□□□ -0.13
DDX39A-212ENST00000590260 METTL1Q9UBP6 276 aaKnown RBP14.23□□□□□ -0.13
DDX39A-212ENST00000590260 APOA2P02652 100 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 VDAC1P21796 283 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 THBS3P49746 956 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 BRWD1-AS2P59051 145 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 RPS16P62249 146 aaKnown RBP14.22□□□□□ -0.13
DDX39A-212ENST00000590260 PJVKQ0ZLH3 352 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 TMEM177Q53S58 311 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 ZNF645Q8N7E2 425 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 KCTD12Q96CX2 325 aaKnown RBP14.22□□□□□ -0.13
DDX39A-212ENST00000590260 S100A16Q96FQ6 103 aaKnown RBP14.22□□□□□ -0.13
DDX39A-212ENST00000590260 DUX3Q96PT4 197 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 P2RX4Q99571 388 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 FAM103A1Q9BTL3 118 aaKnown RBP14.22□□□□□ -0.13
DDX39A-212ENST00000590260 COMMD3Q9UBI1 195 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 NUBP2Q9Y5Y2 271 aa14.22□□□□□ -0.13
DDX39A-212ENST00000590260 TRAV41A0A0B4J266 112 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 SLC25A17O43808 307 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 SPDEFO95238 335 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 CA2P00918 260 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 ELANEP08246 267 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 IGLL1P15814 213 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 LUMP51884 338 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-212ENST00000590260 DEFB136Q30KP8 78 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 ZNF660Q6AZW8 331 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-212ENST00000590260 MRPL41Q8IXM3 137 aaKnown RBP14.21□□□□□ -0.13
DDX39A-212ENST00000590260 KLHL30-AS1Q8NEE0 82 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 FLYWCH2Q96CP2 140 aaKnown RBP14.21□□□□□ -0.13
DDX39A-212ENST00000590260 RAX2Q96IS3 184 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 GPHA2Q96T91 129 aa14.21□□□□□ -0.13
DDX39A-212ENST00000590260 RBM7Q9Y580 266 aaKnown RBP14.21□□□□□ -0.13
DDX39A-212ENST00000590260 HPGDSO60760 199 aa14.2□□□□□ -0.14
DDX39A-212ENST00000590260 ELK1P19419 428 aa14.2□□□□□ -0.14
DDX39A-212ENST00000590260 AADACP22760 399 aa14.2□□□□□ -0.14
DDX39A-212ENST00000590260 CDX1P47902 265 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-212ENST00000590260 ZNF695Q8IW36 515 aa14.2□□□□□ -0.14
DDX39A-212ENST00000590260 TSNAXQ99598 290 aaKnown RBP14.2□□□□□ -0.14
DDX39A-212ENST00000590260 GON7Q9BXV9 100 aa14.2□□□□□ -0.14
DDX39A-212ENST00000590260 RBMX2Q9Y388 322 aaKnown RBP14.2□□□□□ -0.14
DDX39A-212ENST00000590260 PF4P02776 101 aa14.19□□□□□ -0.14
DDX39A-212ENST00000590260 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-212ENST00000590260 NAT1P18440 290 aa14.19□□□□□ -0.14
DDX39A-212ENST00000590260 FCGR2CP31995 323 aa14.19□□□□□ -0.14
DDX39A-212ENST00000590260 PLGLAQ15195 96 aa14.19□□□□□ -0.14
DDX39A-212ENST00000590260 ECSCRQ19T08 205 aa14.19□□□□□ -0.14
DDX39A-212ENST00000590260 PDLIM3Q53GG5 364 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-212ENST00000590260 CXorf66Q5JRM2 361 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms