RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 YIPF6Q96EC8 236 aa14.09□□□□□ -0.15
CIRBP-227ENST00000590188 OR5B12Q96R08 314 aa14.09□□□□□ -0.15
CIRBP-227ENST00000590188 FAM103A1Q9BTL3 118 aaKnown RBP14.09□□□□□ -0.15
CIRBP-227ENST00000590188 KLK15Q9H2R5 256 aa14.09□□□□□ -0.15
CIRBP-227ENST00000590188 TPSG1Q9NRR2 321 aa14.09□□□□□ -0.15
CIRBP-227ENST00000590188 NECAP2Q9NVZ3 263 aa14.09□□□□□ -0.15
CIRBP-227ENST00000590188 AURKAIP1Q9NWT8 199 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-227ENST00000590188 SLC25A17O43808 307 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 SCGNO76038 276 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 CA2P00918 260 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 FCER2P06734 321 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 NFYAP23511 347 aaPredicted RBP14.08□□□□□ -0.16
CIRBP-227ENST00000590188 PSMB8P28062 276 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 PPIFP30405 207 aaKnown RBP14.08□□□□□ -0.16
CIRBP-227ENST00000590188 HOXD3P31249 432 aaPredicted RBP14.08□□□□□ -0.16
CIRBP-227ENST00000590188 MYCNOSP40205 109 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 TIMM50Q3ZCQ8 353 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 Q6ZS49 121 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 PDPNQ86YL7 162 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 FLYWCH2Q96CP2 140 aaKnown RBP14.08□□□□□ -0.16
CIRBP-227ENST00000590188 RCC1LQ96I51 464 aaKnown RBP14.08□□□□□ -0.16
CIRBP-227ENST00000590188 ETV7Q9Y603 341 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 NOTCH3Q9UM47 2321 aa14.08□□□□□ -0.16
CIRBP-227ENST00000590188 A0A1W2PN81 502 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 CCL24O00175 119 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 PTHLHP12272 177 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 CHRNA7P36544 502 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 SRSF7Q16629 238 aaKnown RBP eCLIP14.07□□□□□ -0.16
CIRBP-227ENST00000590188 TMEM65Q6PI78 240 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 BVESQ8NE79 360 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 MRAPQ8TCY5 172 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 P2RX4Q99571 388 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 TSNAXQ99598 290 aaKnown RBP14.07□□□□□ -0.16
CIRBP-227ENST00000590188 GNB4Q9HAV0 340 aa14.07□□□□□ -0.16
CIRBP-227ENST00000590188 DIRAS3O95661 229 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 CDX1P47902 265 aaPredicted RBP14.06□□□□□ -0.16
CIRBP-227ENST00000590188 GNB1P62873 340 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 PITPNAQ00169 270 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 ZNF660Q6AZW8 331 aaPredicted RBP14.06□□□□□ -0.16
CIRBP-227ENST00000590188 GVQW1Q8N7I0 195 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 RNF5Q99942 180 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 DCSTAMPQ9H295 470 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 ZNF580Q9UK33 172 aa14.06□□□□□ -0.16
CIRBP-227ENST00000590188 EGR2P11161 476 aaPredicted RBP14.05□□□□□ -0.16
CIRBP-227ENST00000590188 SLC6A1P30531 599 aa14.05□□□□□ -0.16
CIRBP-227ENST00000590188 RPS19P39019 145 aaKnown RBP14.05□□□□□ -0.16
CIRBP-227ENST00000590188 UNQ5815/PRO19632Q6UWF5 114 aa14.05□□□□□ -0.16
CIRBP-227ENST00000590188 PPP1R27Q86WC6 154 aa14.05□□□□□ -0.16
CIRBP-227ENST00000590188 GRPEL2Q8TAA5 225 aa14.05□□□□□ -0.16
CIRBP-227ENST00000590188 HARBI1Q96MB7 349 aa14.05□□□□□ -0.16
CIRBP-227ENST00000590188 SPATA2Q9UM82 520 aa14.05□□□□□ -0.16
CIRBP-227ENST00000590188 MEIS3P1A6NDR6 274 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 LINC00473A8K010 186 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 SHOXO15266 292 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 SOX15O60248 233 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 SPDEFO95238 335 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 IGLV1-40P01703 118 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 IGLV2-23P01705 113 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 RAB9AP51151 201 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 LUMP51884 338 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-227ENST00000590188 SCAND1P57086 179 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 KRTAP10-11P60412 298 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 CBX3Q13185 183 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 CNIH2Q6PI25 160 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 ZNF491Q8N8L2 437 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 MINDY2Q8NBR6 621 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 LFNGQ8NES3 379 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 C4orf3Q8WVX3 66 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 DIABLOQ9NR28 239 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 ANXA10Q9UJ72 324 aa14.04□□□□□ -0.16
CIRBP-227ENST00000590188 IGKV1D-13A0A0B4J2D9 117 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 ARPC1BO15143 372 aaKnown RBP14.03□□□□□ -0.16
CIRBP-227ENST00000590188 TUSC2O75896 110 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 DUS4LO95620 317 aaKnown RBP14.03□□□□□ -0.16
CIRBP-227ENST00000590188 CTXN2P0C2S0 81 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 IGKV1-13P0DP09 117 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 DUTP33316 252 aaKnown RBP14.03□□□□□ -0.16
CIRBP-227ENST00000590188 ARPC4P59998 168 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 NCS1P62166 190 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 PJVKQ0ZLH3 352 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 KIAA0141Q14154 515 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-227ENST00000590188 FXYD3Q14802 87 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 RTL8BQ17RB0 113 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 C19orf54Q5BKX5 351 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 OR2B11Q5JQS5 317 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 REC114Q7Z4M0 266 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 BEST4Q8NFU0 473 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 OR11H1Q8NG94 326 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 MYOZ3Q8TDC0 251 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 ARPC1AQ92747 370 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 MS4A10Q96PG2 267 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 ALX4Q9H161 411 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-227ENST00000590188 AUNIPQ9H7T9 357 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 FOXA2Q9Y261 457 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-227ENST00000590188 OR2W1Q9Y3N9 320 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 NUBP2Q9Y5Y2 271 aa14.03□□□□□ -0.16
CIRBP-227ENST00000590188 SRRM4A7MD48 611 aaKnown RBP14.02□□□□□ -0.17
CIRBP-227ENST00000590188 CNIH1O95406 144 aa14.02□□□□□ -0.17
CIRBP-227ENST00000590188 CRYZL1O95825 349 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms