RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 TMEM106BQ9NUM4 274 aa6.22□□□□□ -1.41
SMAD4-209ENST00000589941 A0A0A6YYD4 124 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 CCSO14618 274 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 TAAR5O14804 337 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 NUPL2O15504 423 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 SNAPINO95295 136 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 AHSA1O95433 338 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 IGLV3-1P01715 115 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 IGHV3-13P01766 116 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 GAPDHP04406 335 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 CD5P06127 495 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 HRH1P35367 487 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 PMELP40967 661 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 RAB13P51153 203 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 DAP3P51398 398 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 CAV2P51636 162 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 EIF5AP63241 154 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 TAF13Q15543 124 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM268Q5VZI3 342 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 BTNL8Q6UX41 500 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 NDUFA11Q86Y39 141 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM123Q8N131 208 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 JAGN1Q8N5M9 183 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF283Q8N7M2 679 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 ADAD2Q8NCV1 583 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 TERB2Q8NHR7 220 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 NUDCD2Q8WVJ2 157 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 LHX4Q969G2 390 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 RRNAD1Q96FB5 475 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 SCGB3A2Q96PL1 93 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 NRIP2Q9BQI9 281 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 PDCD10Q9BUL8 212 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 SLC5A7Q9GZV3 580 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 ARV1Q9H2C2 271 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 BIN3Q9NQY0 253 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 ZFP57Q9NU63 452 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 RCC2Q9P258 522 aaKnown RBP6.21□□□□□ -1.42
SMAD4-209ENST00000589941 B3GAT1Q9P2W7 334 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 GTF2A1LQ9UNN4 478 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 MUC4Q99102 2169 aa6.21□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM269A0A1B0GVZ9 245 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 MEX3AA1L020 520 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 C11orf98E9PRG8 122 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 RNASEK-C17orf49H0YIS7 233 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 HLA-DQA2P01906 255 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 CSTBP04080 98 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 FCGR3AP08637 254 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 PGAM2P15259 253 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 HIST1H1DP16402 221 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF823P16415 610 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 PVALBP20472 110 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 MDH2P40926 338 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 SULT1A2P50226 295 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 DLX1P56177 255 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 SUPT4H1P63272 117 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 ODF4Q2M2E3 257 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 ANXA2RQ3ZCQ2 193 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 SCGB2B2Q4G0G5 96 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 TCTEX1D4Q5JR98 221 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 CARD17Q5XLA6 110 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 OR10K2Q6IF99 312 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 HAGHLQ6PII5 290 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 H1FNTQ75WM6 255 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 DCXRQ7Z4W1 244 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 UEVLDQ8IX04 471 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 GPR137CQ8N3F9 429 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 COMMD1Q8N668 190 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 SCCPDHQ8NBX0 429 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 OR52N4Q8NGI2 321 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 GLYATL2Q8WU03 294 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 DDIT4LQ96D03 193 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 ADAT3Q96EY9 351 aaPredicted RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 SEC22AQ96IW7 307 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 C2orf50Q96LR7 162 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 MRPL13Q9BYD1 178 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 C5orf66Q9H5L9 145 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 PARP11Q9NR21 331 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 UQCC1Q9NVA1 299 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 GHRLQ9UBU3 117 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 LSM4Q9Y4Z0 139 aaKnown RBP6.2□□□□□ -1.42
SMAD4-209ENST00000589941 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
SMAD4-209ENST00000589941 IGKV1D-43A0A0B4J1Z2 117 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 LOC102725191A0A1B0GVB3 256 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 MSGN1A6NI15 193 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 COLCA2A8K830 154 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 P2RY10O00398 339 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SIGLEC5O15389 551 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 CHST1O43916 411 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 APOC1P02654 83 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 CD55P08174 381 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 H2BFMP0C1H6 154 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 PET100P0DJ07 73 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 MAS1LP35410 378 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 NPBWR1P48145 328 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 ZNF133P52736 654 aaPredicted RBP6.19□□□□□ -1.42
SMAD4-209ENST00000589941 TMEM50BP56557 158 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 BPIFB3P59826 476 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 HMGN3Q15651 99 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 SGCAQ16586 387 aa6.19□□□□□ -1.42
SMAD4-209ENST00000589941 RNF212Q495C1 297 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms