RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 RAP2CQ9Y3L5 183 aa4.59□□□□□ -1.67
TPM4-210ENST00000588507 LRRC42Q9Y546 428 aa4.59□□□□□ -1.67
TPM4-210ENST00000588507 LINC00473A8K010 186 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 CIB2O75838 187 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 SERPINA3P01011 423 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 TTRP02766 147 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 CPEP16870 476 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 SOX2P48431 317 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 NUTF2P61970 127 aaKnown RBP4.58□□□□□ -1.68
TPM4-210ENST00000588507 LIPEQ05469 1076 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 ALKBH1Q13686 389 aaKnown RBP4.58□□□□□ -1.68
TPM4-210ENST00000588507 PAGE3Q5JUK9 113 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 LINC01590Q5TEZ4 76 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 NXNL2Q5VZ03 156 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 OR10K2Q6IF99 312 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 FAM71F2Q6NXP2 309 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 PLET1Q6UQ28 207 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 SSX9Q7RTT3 188 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 AMIGO2Q86SJ2 522 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 IQCF1Q8N6M8 205 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 SLC37A3Q8NCC5 494 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 OR5AN1Q8NGI8 311 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 OTOSQ8NHW6 89 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 MCUR1Q96AQ8 359 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 APOPT1Q96IL0 206 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 RAB40CQ96S21 281 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 PAIP2Q9BPZ3 127 aaKnown RBP4.58□□□□□ -1.68
TPM4-210ENST00000588507 ANKRD19PQ9H560 264 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 VCX3AQ9NNX9 186 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 SNX13Q9Y5W8 968 aa4.58□□□□□ -1.68
TPM4-210ENST00000588507 IGHV3OR16-12A0A075B7B8 117 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 TRBV7-1A0A0A6YYK4 115 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 A0A0J9YXV3 536 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 A0A1B0GTI1 187 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 A6NHS1 94 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 KNCNA6PVL3 124 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 K7EMT4 169 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 DNASE2O00115 360 aaPredicted RBP4.57□□□□□ -1.68
TPM4-210ENST00000588507 FGF9P31371 208 aaPredicted RBP4.57□□□□□ -1.68
TPM4-210ENST00000588507 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
TPM4-210ENST00000588507 MICAQ29983 383 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 Q6ZSR3 168 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 BCDIN3DQ7Z5W3 292 aaKnown RBP4.57□□□□□ -1.68
TPM4-210ENST00000588507 SLC25A42Q86VD7 318 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 ELMOD2Q8IZ81 293 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 DNAJC9Q8WXX5 260 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 GGHQ92820 318 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 NSL1Q96IY1 281 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 TPD52L3Q96J77 140 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 RHPN1-AS1Q9BWJ2 59 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 NMNAT2Q9BZQ4 307 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 OR2S2Q9NQN1 319 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 MSRB1Q9NZV6 116 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 NDUFA13Q9P0J0 144 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 ABCD2Q9UBJ2 740 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 SMPXQ9UHP9 88 aa4.57□□□□□ -1.68
TPM4-210ENST00000588507 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 CHEK1O14757 476 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 ARPC2O15144 300 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 GYG2O15488 501 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 PSCAO43653 123 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 ZNF207O43670 478 aaKnown RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 EDF1O60869 148 aaKnown RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 HBZP02008 142 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 IGKV1-16P04430 117 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 ATP5G1P05496 136 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 CRYGBP07316 175 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 GPR183P32249 361 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 ATP5G3P48201 142 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 MTPNP58546 118 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 PLA2G7Q13093 441 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 DNAL1Q4LDG9 190 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 ACTL10Q5JWF8 245 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 UBE2UQ5VVX9 321 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 FAM90A2PQ658T7 463 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 FAM24BQ8N5W8 94 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 DRAXINQ8NBI3 349 aaPredicted RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 SRSF12Q8WXF0 261 aaKnown RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 GNPNAT1Q96EK6 184 aaPredicted RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 SIKE1Q9BRV8 207 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 C20orf24Q9BUV8 137 aa4.56□□□□□ -1.68
TPM4-210ENST00000588507 DPCDQ9BVM2 203 aaPredicted RBP4.56□□□□□ -1.68
TPM4-210ENST00000588507 LOC102723971A0A1B0GUV8 181 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 FKBP6O75344 327 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 BPGMP07738 259 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 DEFB130BP0DP73 79 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 DEFB130AP0DP74 79 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 OR2B8PP59922 312 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 CRMP1Q14194 572 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 TNXAQ16473 311 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 ZNF829Q3KNS6 432 aaPredicted RBP4.55□□□□□ -1.68
TPM4-210ENST00000588507 CYBRD1Q53TN4 286 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 DEGS2Q6QHC5 323 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 DLEU7Q6UYE1 221 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 CMTM1Q8IZ96 169 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 SUMF2Q8NBJ7 301 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 TMEM116Q8NCL8 245 aa4.55□□□□□ -1.68
TPM4-210ENST00000588507 OR10A6Q8NH74 314 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms