RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DDB2Q92466 427 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 S1PR3Q99500 378 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 HSD17B10Q99714 261 aaKnown RBP9.17□□□□□ -0.94
VMP1-207ENST00000588131 TMEM222Q9H0R3 208 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
VMP1-207ENST00000588131 MGAT4CQ9UBM8 478 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 SHPKQ9UHJ6 478 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 ITGB1BP2Q9UKP3 347 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 VPS13CQ709C8 3753 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 PRRC2AP48634 2157 aaKnown RBP9.17□□□□□ -0.94
VMP1-207ENST00000588131 TACC2O95359 2948 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 GOSR2O14653 212 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 RAMP3O60896 148 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 ADAP1O75689 374 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 SIX6O95475 246 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 TGFAP01135 160 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 IGKV1-39P01597 117 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 IGKV1D-39P04432 117 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 TRAPPC2P0DI81 140 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 TRAPPC2BP0DI82 140 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 IL3RAP26951 378 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 THBS3P49746 956 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 GZMKP49863 264 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 CD300CQ08708 224 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 FAM71F2Q6NXP2 309 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 LHFPL4Q7Z7J7 247 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 SELENOHQ8IZQ5 122 aaKnown RBP9.16□□□□□ -0.94
VMP1-207ENST00000588131 SPAG16Q8N0X2 631 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 LGI3Q8N145 548 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 LRTM2Q8N967 370 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 WDR89Q96FK6 387 aaPredicted RBP9.16□□□□□ -0.94
VMP1-207ENST00000588131 C18orf12Q96KH6 178 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 TMEM56Q96MV1 263 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 NABP2Q9BQ15 211 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 C7orf69Q9H7B7 122 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 AMMECR1Q9Y4X0 333 aaPredicted RBP9.16□□□□□ -0.94
VMP1-207ENST00000588131 AUP1Q9Y679 476 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 TMEM56-RWDD3S4R434 201 aa9.16□□□□□ -0.94
VMP1-207ENST00000588131 CENPEQ02224 2701 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 CENPVL3A0A0U1RRI6 287 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 SMAD7O15105 426 aaKnown RBP9.15□□□□□ -0.94
VMP1-207ENST00000588131 FCGR3BO75015 233 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 B3GALNT1O75752 331 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 CDS2O95674 445 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 AVPP01185 164 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 HOXB5P09067 269 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 HTR1DP28221 377 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 LPAR6P43657 344 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 UBE2E1P51965 193 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 ZNF816Q0VGE8 651 aaPredicted RBP9.15□□□□□ -0.94
VMP1-207ENST00000588131 TPTE2P1Q5T6R2 138 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 TMEM268Q5VZI3 342 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 LYZL2Q7Z4W2 148 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 TGIF2LXQ8IUE1 241 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 SLC35G3Q8N808 338 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 C17orf50Q8WW18 174 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 NEURL2Q9BR09 285 aa9.15□□□□□ -0.94
VMP1-207ENST00000588131 TEX15Q9BXT5 2789 aa9.15□□□□□ -0.95
VMP1-207ENST00000588131 CSMD1Q96PZ7 3565 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 TRAV40A0A0B4J280 105 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 LEUTXA8MZ59 168 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 H0YJW9 148 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 S1PR2O95136 353 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 SERPINE2P07093 398 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 IGHV4-38-2P0DP08 117 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 HLA-GP17693 338 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 GATA3P23771 443 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 PAX6P26367 422 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 H2BFSP57053 126 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 SRPXP78539 464 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 CD83Q01151 205 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 RUSC1-AS1Q66K80 236 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 CYB5R2Q6BCY4 276 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 AKAP14Q86UN6 197 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 ZNF695Q8IW36 515 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 DYNAPQ8N1N2 210 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 OR5M8Q8NGP6 311 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 RBPMSQ93062 196 aaKnown RBP9.14□□□□□ -0.95
VMP1-207ENST00000588131 RPEQ96AT9 228 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 AJUBAQ96IF1 538 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 ADTRPQ96IZ2 230 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 ST6GAL2Q96JF0 529 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 CHIAQ9BZP6 476 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 RAB18Q9NP72 206 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 SLC35D1Q9NTN3 355 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 DPM3Q9P2X0 92 aa9.14□□□□□ -0.95
VMP1-207ENST00000588131 IGHV3-72A0A0B4J1Y9 119 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 IGHV1-69DA0A0B4J2H0 117 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 IGHV1-3A0A0C4DH29 117 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 A0A1W2PPI3 338 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 NPFFO15130 113 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 PFDN1O60925 122 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 CCNKO75909 580 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 IGKV1-5P01602 117 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 IGHV1-69P01742 117 aa9.13□□□□□ -0.95
VMP1-207ENST00000588131 GAPDHP04406 335 aaKnown RBP9.13□□□□□ -0.95
VMP1-207ENST00000588131 RPA2P15927 270 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms