RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 C12orf45Q8N5I9 185 aaPredicted RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 LRTM2Q8N967 370 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 OR4P4Q8NGL7 312 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 GLYATL2Q8WU03 294 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 S1PR3Q99500 378 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 PHB2Q99623 299 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 TMEM222Q9H0R3 208 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 DBX1A6NMT0 343 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 A8MV72 311 aaPredicted RBP12.1□□□□□ -0.47
NFIX-208ENST00000587260 TNFSF12O43508 249 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 OR5AC1P0C628 307 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 FOSL1P15407 271 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 UCP1P25874 307 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 IL3RAP26951 378 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 UBE2E1P51965 193 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 CATR1Q13166 79 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 RPL39P5Q59GN2 51 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 COQ8AQ8NI60 647 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 GPHA2Q96T91 129 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 MED28Q9H204 178 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 GSX1Q9H4S2 264 aaPredicted RBP12.1□□□□□ -0.47
NFIX-208ENST00000587260 LIN7CQ9NUP9 197 aaKnown RBP12.1□□□□□ -0.47
NFIX-208ENST00000587260 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
NFIX-208ENST00000587260 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 HIVEP1P15822 2718 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 IGHV1-69DA0A0B4J2H0 117 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 BUB1B-PAK6H3BSN5 160 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 NPFFO15130 113 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 IGHV1-69P01742 117 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 HLA-GP17693 338 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
NFIX-208ENST00000587260 SRPXP78539 464 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 SLC9A3R2Q15599 337 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 FAM120AOSQ5T036 256 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 LIAT1Q6ZQX7 453 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 LHFPL4Q7Z7J7 247 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 CASTOR1Q8WTX7 329 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 DDB2Q92466 427 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 ADTRPQ96IZ2 230 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 TMEM56Q96MV1 263 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 AMMECR1Q9Y4X0 333 aaPredicted RBP12.09□□□□□ -0.47
NFIX-208ENST00000587260 TMEM56-RWDD3S4R434 201 aa12.09□□□□□ -0.47
NFIX-208ENST00000587260 PIGBOS1A0A0B4J2F0 54 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 LINC00473A8K010 186 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 M0R1X1 148 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 SSNA1O43805 119 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 CDS2O95674 445 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 SULT1A3P0DMM9 295 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 SULT1A4P0DMN0 295 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 PAX6P26367 422 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 SAA4P35542 130 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 THBS3P49746 956 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 LGALS4P56470 323 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 BRWD1-AS2P59051 145 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 DIAPH2-AS1Q14236 149 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 SP6Q3SY56 376 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 LDLRAD2Q5SZI1 272 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 OR51H1Q8NH63 302 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 C17orf50Q8WW18 174 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
NFIX-208ENST00000587260 RBFOX2O43251 390 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■□□□□ 10.7
NFIX-208ENST00000587260 CT45A6P0DMU7 189 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 CT45A5P0DMU8 189 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 CT45A7P0DMV0 189 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 RPA2P15927 270 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 EPHA1P21709 976 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 HTR1DP28221 377 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 REG1BP48304 166 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 TAGLNQ01995 201 aaKnown RBP12.07□□□□□ -0.48
NFIX-208ENST00000587260 ZNF585BQ52M93 769 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 LGI3Q8N145 548 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 CD300LFQ8TDQ1 290 aa12.07□□□□□ -0.48
NFIX-208ENST00000587260 SOX21Q9Y651 276 aaPredicted RBP12.07□□□□□ -0.48
NFIX-208ENST00000587260 FSHBP01225 129 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 KIR2DS2P43631 304 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
NFIX-208ENST00000587260 FCN2Q15485 313 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 MINOS1Q5TGZ0 78 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 ZNF383Q8NA42 475 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 TCTEX1D2Q8WW35 142 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 C22orf15Q8WYQ4 148 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 RAB18Q9NP72 206 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 DPM3Q9P2X0 92 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 PRELID3BQ9Y3B1 194 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 HILPDAQ9Y5L2 63 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 MINOS1-NBL1R4GNA1 71 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 A0A0U1RQK1 487 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 LEUTXA8MZ59 168 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 TXNL1O43396 289 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 GAPDHP04406 335 aaKnown RBP12.06□□□□□ -0.48
NFIX-208ENST00000587260 SERPINE2P07093 398 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 CEACAM3P40198 252 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 MIDNQ504T8 468 aa12.06□□□□□ -0.48
NFIX-208ENST00000587260 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms