RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 A8MXK9 166 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 ARG1P05089 322 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 SRSF4Q08170 494 aaKnown RBP10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 DUX4L9Q6RFH8 374 aaPredicted RBP10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 NEUROG1Q92886 237 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 PPIAL4EA0A075B759 164 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 PPIAL4DF5H284 164 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 APOA2P02652 100 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 FBP1P09467 338 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 PPIAL4FP0DN26 164 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 RAB5CP51148 216 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 TMPRSS3P57727 454 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 HFEQ30201 348 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 RARRES2Q99969 163 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 SLC35D1Q9NTN3 355 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 CISD1Q9NZ45 108 aaKnown RBP10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 PPIAL4AQ9Y536 164 aa10.42□□□□□ -0.74
SMARCA4-208ENST00000585799 CD55P08174 381 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 KITLGP21583 273 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 RPS10P46783 165 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 GNB1P62873 340 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 FFAR4Q5NUL3 377 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 IGFL2Q6UWQ7 119 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 OR4D5Q8NGN0 318 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 RHOVQ96L33 236 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 UNKLQ9H9P5 680 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 MMP24Q9Y5R2 645 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 KIAA1549Q9HCM3 1950 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 IGHV1-46P01743 117 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 RND3P61587 244 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 RPP30P78346 268 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 LY6DQ14210 128 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 HSD17B10Q99714 261 aaKnown RBP10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 PARP11Q9NR21 331 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 LAMP3Q9UQV4 416 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 CDK2AP1O14519 115 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 PITX3O75364 302 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 CCL3L1P16619 93 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 TIMP3P35625 211 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 TGIF2LYQ8IUE0 185 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 LFNGQ8NES3 379 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 TMEM171Q8WVE6 324 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 SSMEM1Q8WWF3 244 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 WSB1Q9Y6I7 421 aa10.41□□□□□ -0.74
SMARCA4-208ENST00000585799 PPIHO43447 177 aaKnown RBP10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 HOXD4P09016 255 aaPredicted RBP10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 SLC25A6P12236 298 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 ADIRFQ15847 76 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 RTL8BQ17RB0 113 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 STUMQ69YW2 141 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 TRAT1Q6PIZ9 186 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 IGKV1D-17A0A075B6S4 117 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 DUXBA0A1W2PPF3 345 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 NUDT19A8MXV4 375 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 IGKV1-5P01602 117 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 TNFRSF9Q07011 255 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 RAB31Q13636 194 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 RHEBQ15382 184 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 RAB39BQ96DA2 213 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 CIB3Q96Q77 187 aaPredicted RBP10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 COMMD5Q9GZQ3 224 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 PRELID1Q9Y255 219 aa10.4□□□□□ -0.74
SMARCA4-208ENST00000585799 MAP1LC3B2A6NCE7 125 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 C1orf196B1AJZ1 125 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 SRRM5B3KS81 715 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 MSMPQ1L6U9 139 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 ABHD12Q8N2K0 398 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 MAP1LC3BQ9GZQ8 125 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 SMCO4Q9NRQ5 59 aa10.4□□□□□ -0.75
SMARCA4-208ENST00000585799 DPRXA6NFQ7 191 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 TMEM50AO95807 157 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 HNF1AP20823 631 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 HES1Q14469 280 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 LRTM2Q8N967 370 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 OR4F5Q8NH21 305 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 WFIKKN1Q96NZ8 548 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 OR4F4Q96R69 305 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 PATZ1Q9HBE1 687 aaKnown RBP10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 RBFOX3A6NFN3 312 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 IFNL4K9M1U5 179 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 RAB5BP61020 215 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ID3Q02535 119 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 MOB3BQ86TA1 216 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 OR4S2Q8NH73 311 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ACY3Q96HD9 319 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 TUBG2Q9NRH3 451 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 TNCP24821 2201 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ZNF292O60281 2723 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 NQO2P16083 231 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 ERVK11-1P61568 191 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 HMGN3Q15651 99 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 AWAT1Q58HT5 328 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 NMSQ5H8A3 153 aa10.39□□□□□ -0.75
SMARCA4-208ENST00000585799 BTNL8Q6UX41 500 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms