RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ITPR2Q14571 2701 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 GATA2P23769 480 aaPredicted RBP8.56□□□□□ -1.04
RFFL-212ENST00000584655 EWSR1Q01844 656 aaKnown RBP eCLIP8.56□□□□□ -1.04
RFFL-212ENST00000584655 BAXQ07812 192 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 PLGLAQ15195 96 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 MLANAQ16655 118 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 DNM1P46Q6ZS02 220 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 UBAC2Q8NBM4 344 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 TLNRD1Q9H1K6 362 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 DOK5Q9P104 306 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 TRBV23-1A0A0A0MS06 115 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.55□□□□□ -1.04
RFFL-212ENST00000584655 SPP1P10451 314 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 NPBWR1P48145 328 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 SLC25A22Q9H936 323 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 GNG13Q9P2W3 67 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 TRGV10A0A0A0MS01 117 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 ZNF98A6NK75 572 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 TRIM77I1YAP6 450 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 HIST2H2BCQ6DN03 193 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 MOB3BQ86TA1 216 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 RARRES2Q99969 163 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 PCGF1Q9BSM1 259 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 SFXN3Q9BWM7 321 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 PATZ1Q9HBE1 687 aaKnown RBP8.55□□□□□ -1.04
RFFL-212ENST00000584655 SH2D7A6NKC9 451 aaPredicted RBP8.55□□□□□ -1.04
RFFL-212ENST00000584655 OR2F1Q13607 317 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 GCSAMLQ5JQS6 135 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 DHRS11Q6UWP2 260 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 SCGB1C1Q8TD33 95 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 RXFP4Q8TDU9 374 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 CALYQ9NYX4 217 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 NPTNQ9Y639 398 aa8.55□□□□□ -1.04
RFFL-212ENST00000584655 ARG1P05089 322 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 ZNF324BQ6AW86 544 aaPredicted RBP8.54□□□□□ -1.04
RFFL-212ENST00000584655 SHARPINQ9H0F6 387 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 VSIRQ9H7M9 311 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 CD37P11049 281 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 MDKP21741 143 aaPredicted RBP8.54□□□□□ -1.04
RFFL-212ENST00000584655 HOXA1P49639 335 aaPredicted RBP8.54□□□□□ -1.04
RFFL-212ENST00000584655 CCL20P78556 96 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 MRPS11P82912 194 aaKnown RBP8.54□□□□□ -1.04
RFFL-212ENST00000584655 STUMQ69YW2 141 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 ZNF497Q6ZNH5 498 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 STX12Q86Y82 276 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 TMEM252Q8N6L7 170 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 OR4A16Q8NH70 328 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 ARPC4-TTLL3A0A0A6YYG9 625 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 IGKV1-39P01597 117 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 IGKV1-5P01602 117 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 IGKV1D-39P04432 117 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 CRYBA1P05813 215 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 WNT2P09544 360 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 CHRNB4P30926 498 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 KLRD1Q13241 179 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 HFEQ30201 348 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 HCP5Q6MZN7 132 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 LPCAT3Q6P1A2 487 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 REG4Q9BYZ8 158 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 TMPRSS5Q9H3S3 457 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 FBLN5Q9UBX5 448 aa8.54□□□□□ -1.04
RFFL-212ENST00000584655 LRRC30A6NM36 301 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 VSTM5A8MXK1 200 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 H3BTX0 84 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 B3GALNT1O75752 331 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 CEACAM4O75871 244 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 ATP6V0CP27449 155 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PPP1R35Q8TAP8 253 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 S1PR3Q99500 378 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 FAM103A1Q9BTL3 118 aaKnown RBP8.53□□□□□ -1.04
RFFL-212ENST00000584655 EGLN1Q9GZT9 426 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 ZDHHC8Q9ULC8 765 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PRELID3BQ9Y3B1 194 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 HMSDA8MTL9 139 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 DVL1O14640 695 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 DEDDO75618 318 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 VDAC1P21796 283 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 TUBG1P23258 451 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 AKR1C8PQ5T2L2 129 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 QTRT1Q9BXR0 403 aaKnown RBP8.53□□□□□ -1.04
RFFL-212ENST00000584655 TEX15Q9BXT5 2789 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PPIAL4EA0A075B759 164 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 C17orf100A8MU93 164 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 E5RGE8 158 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PPIAL4DF5H284 164 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PPIAL4FP0DN26 164 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 NQO2P16083 231 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 RAB5BP61020 215 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 ARL16Q0P5N6 197 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PJVKQ0ZLH3 352 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 C1orf229Q6ZS94 237 aaPredicted RBP8.53□□□□□ -1.04
RFFL-212ENST00000584655 OR4A4PQ8NGN8 299 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 ACY3Q96HD9 319 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 PKIBQ9C010 78 aa8.53□□□□□ -1.04
RFFL-212ENST00000584655 RPH3ALQ9UNE2 315 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms