RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 NCOR2Q9Y618 2525 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 TRBV6-7A0A0A0MS04 114 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 TGIF2-C20orf24A0A0A6YYL0 155 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 IGHV3-21A0A0B4J1V1 117 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 IGHV3-72A0A0B4J1Y9 119 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 PRR33A8MZF0 331 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 CFPP27918 469 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 ZNF90Q03938 601 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 BSXQ3C1V8 233 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 TAF15Q92804 592 aaKnown RBP eCLIP10.09□□□□□ -0.79
ERBB2-218ENST00000584450 HSD17B10Q99714 261 aaKnown RBP10.09□□□□□ -0.79
ERBB2-218ENST00000584450 RALYQ9UKM9 306 aaKnown RBP10.09□□□□□ -0.79
ERBB2-218ENST00000584450 A0A0G2JRQ6 117 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 SELLP14151 372 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 HERPUD1Q15011 391 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 RTL8BQ17RB0 113 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 TMEM68Q96MH6 324 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 IL36GQ9NZH8 169 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
ERBB2-218ENST00000584450 ODAMA1E959 279 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 C11orf94C9JXX5 98 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 AP4M1O00189 453 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 CNIH1O95406 144 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 MBP02144 154 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 DEFA6Q01524 100 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 TNFRSF9Q07011 255 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 SAXO1Q8IYX7 474 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 TMEM171Q8WVE6 324 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 C22orf15Q8WYQ4 148 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 ZNF251Q9BRH9 671 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 MALRD1Q5VYJ5 2156 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 MARCH11A6NNE9 402 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 CRYABP02511 175 aaKnown RBP10.08□□□□□ -0.8
ERBB2-218ENST00000584450 COX7A1P24310 79 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 RBPJQ06330 500 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 C9orf152Q5JTZ5 239 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 TMEM42Q69YG0 159 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 TMEM108Q6UXF1 575 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 LRP11Q86VZ4 500 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 BAGE3Q86Y29 109 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 BAGE2Q86Y30 109 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 LYPD6Q86Y78 171 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 GINS3Q9BRX5 216 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 NGBQ9NPG2 151 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 VAX2Q9UIW0 290 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 SSUH2Q9Y2M2 353 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 F6UZH7 168 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 BCL2P10415 239 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 GALR1P47211 349 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 HFEQ30201 348 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 FAM78BQ5VT40 261 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 VSIRQ9H7M9 311 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 SLC35D1Q9NTN3 355 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 METRNQ9UJH8 293 aa10.08□□□□□ -0.8
ERBB2-218ENST00000584450 IGKV3D-15A0A087WSY6 115 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 PTBP3O95758 552 aaKnown RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 HSPB1P04792 205 aaKnown RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 RNF212Q495C1 297 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 OR6C3Q9NZP0 311 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 IGKV1-6A0A0C4DH72 117 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 S100A8P05109 93 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 ZNF883P0CG24 379 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 GABRA6Q16445 453 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 DHRS7BQ6IAN0 325 aaPredicted RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 OR4P4Q8NGL7 312 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 RAB24Q969Q5 203 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 RCC1LQ96I51 464 aaKnown RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 PLSCR2Q9NRY7 297 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 MIOXQ9UGB7 285 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 DKK1O94907 266 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 FABP1P07148 127 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 EIF2S3P41091 472 aaKnown RBP10.07□□□□□ -0.8
ERBB2-218ENST00000584450 MIC13Q5XKP0 118 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 Q6ZRM9 215 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 LINC00596Q86U02 117 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 MED12LQ86YW9 2145 aa10.07□□□□□ -0.8
ERBB2-218ENST00000584450 TMEM210A6NLX4 147 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 TNFRSF1AP19438 455 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 TCL1AP56279 114 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
ERBB2-218ENST00000584450 MOB3BQ86TA1 216 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 ZNF645Q8N7E2 425 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 SLC35E1Q96K37 410 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 RNF7Q9UBF6 113 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 LY86O95711 162 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 KHDC3LQ587J8 217 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 SLC35E3Q7Z769 313 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 MRGPRGQ86SM5 289 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 LINC00518Q8N0U6 118 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 NEIL1Q96FI4 390 aaPredicted RBP10.06□□□□□ -0.8
ERBB2-218ENST00000584450 SAP30LQ9HAJ7 183 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 EML5Q05BV3 1969 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 ACACBO00763 2458 aa10.06□□□□□ -0.8
ERBB2-218ENST00000584450 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms