RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 IGHG4P01861 327 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 IGKV1-16P04430 117 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 LGALS7P47929 136 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 TMEM69Q5SWH9 247 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 HOGA1Q86XE5 327 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 ANKRD13BQ86YJ7 626 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 ZNF645Q8N7E2 425 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 ACOT12Q8WYK0 555 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 CMTM3Q96MX0 182 aa21.34■■□□□ 1.01
SMARCD2-210ENST00000584400 ATP6V0E1O15342 81 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 HLA-DQB1P01920 261 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 NFYAP23511 347 aaPredicted RBP21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 RORCP51449 518 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 CFHR3Q02985 330 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 PSG5Q15238 335 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 ZNF695Q8IW36 515 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 RNF152Q8N8N0 203 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 WFDC9Q8NEX5 89 aa21.33■■□□□ 1.01
SMARCD2-210ENST00000584400 TRAV41A0A0B4J266 112 aa21.32■■□□□ 1
SMARCD2-210ENST00000584400 LINC00205P59089 165 aa21.32■■□□□ 1
SMARCD2-210ENST00000584400 TMEM267Q0VDI3 215 aaPredicted RBP21.32■■□□□ 1
SMARCD2-210ENST00000584400 TCTEX1D1Q8N7M0 179 aa21.32■■□□□ 1
SMARCD2-210ENST00000584400 KLHL30-AS1Q8NEE0 82 aa21.32■■□□□ 1
SMARCD2-210ENST00000584400 NECAP2Q9NVZ3 263 aa21.32■■□□□ 1
SMARCD2-210ENST00000584400 SMIM31A0A1B0GVY4 71 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 GABARAPO95166 117 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 CX3CL1P78423 397 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 SAMD5Q5TGI4 173 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 TMEM65Q6PI78 240 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 GPR141Q7Z602 305 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 AP3S1Q92572 193 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 IFT46Q9NQC8 304 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 COMMD3Q9UBI1 195 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 WSB1Q9Y6I7 421 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 WNK1Q9H4A3 2382 aa21.31■■□□□ 1
SMARCD2-210ENST00000584400 J3QRK9 145 aa21.3■■□□□ 1
SMARCD2-210ENST00000584400 RPLP1P05386 114 aaKnown RBP21.3■■□□□ 1
SMARCD2-210ENST00000584400 DUTP33316 252 aaKnown RBP21.3■■□□□ 1
SMARCD2-210ENST00000584400 CDX1P47902 265 aaPredicted RBP21.3■■□□□ 1
SMARCD2-210ENST00000584400 ZNF562Q6V9R5 426 aa21.3■■□□□ 1
SMARCD2-210ENST00000584400 GVQW1Q8N7I0 195 aa21.3■■□□□ 1
SMARCD2-210ENST00000584400 BVESQ8NE79 360 aa21.3■■□□□ 1
SMARCD2-210ENST00000584400 ABHD5Q8WTS1 349 aa21.3■■□□□ 1
SMARCD2-210ENST00000584400 HARBI1Q96MB7 349 aa21.3■■□□□ 1
SMARCD2-210ENST00000584400 G3V4G9 280 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 SHOXO15266 292 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 PSMB8P28062 276 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 PPIFP30405 207 aaKnown RBP21.29■■□□□ 1
SMARCD2-210ENST00000584400 MYCNOSP40205 109 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 TMEM177Q53S58 311 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 MZT2AQ6P582 158 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 C1QL4Q86Z23 238 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 PRELID3BQ9Y3B1 194 aa21.29■■□□□ 1
SMARCD2-210ENST00000584400 SLC25A17O43808 307 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 TUSC2O75896 110 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 DUS4LO95620 317 aaKnown RBP21.28■■□□□ 1
SMARCD2-210ENST00000584400 APOA1P02647 267 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 CRIP2P52943 208 aaPredicted RBP21.28■■□□□ 1
SMARCD2-210ENST00000584400 TAS2R20P59543 309 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 GPR107Q5VW38 600 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 C8orf86Q6ZUL3 223 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 PPP1R27Q86WC6 154 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 C5orf30Q96GV9 206 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 CLCC1Q96S66 551 aa21.28■■□□□ 1
SMARCD2-210ENST00000584400 MRPS7Q9Y2R9 242 aaKnown RBP21.28■■□□□ 1
SMARCD2-210ENST00000584400 RBMX2Q9Y388 322 aaKnown RBP21.28■■□□□ 1
SMARCD2-210ENST00000584400 G3V318 75 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 FCN1O00602 326 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 FCGR2CP31995 323 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 PRSS3P35030 304 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 CTF1Q16619 201 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 ECSCRQ19T08 205 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 OR5AP2Q8NGF4 316 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 DDB2Q92466 427 aa21.27■■□□□ 1
SMARCD2-210ENST00000584400 RCC1LQ96I51 464 aaKnown RBP21.27■■□□□ 1
SMARCD2-210ENST00000584400 CA2P00918 260 aa21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 PTHLHP12272 177 aa21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 CD40LGP29965 261 aa21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 VMA21Q3ZAQ7 101 aa21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 KCTD9Q7L273 389 aa21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 MINDY2Q8NBR6 621 aa21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 OSR1Q8TAX0 266 aaPredicted RBP21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 HSD17B10Q99714 261 aaKnown RBP21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 FOXA2Q9Y261 457 aaPredicted RBP21.26■□□□□ 0.99
SMARCD2-210ENST00000584400 IGLV1-40P01703 118 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 ALDH3B2P48448 385 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 NDPQ00604 133 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 MSMO1Q15800 293 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 BEAN1Q3B7T3 259 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 AKIRIN2Q53H80 203 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 OXLD1Q5BKU9 147 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 KPRPQ5T749 579 aaPredicted RBP21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 PYHIN1Q6K0P9 492 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 GPR61Q9BZJ8 451 aa21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 NAA50Q9GZZ1 169 aaKnown RBP21.25■□□□□ 0.99
SMARCD2-210ENST00000584400 VWFP04275 2813 aa21.24■□□□□ 0.99
SMARCD2-210ENST00000584400 IGKV1D-13A0A0B4J2D9 117 aa21.24■□□□□ 0.99
SMARCD2-210ENST00000584400 A0A1W2PN81 502 aa21.24■□□□□ 0.99
SMARCD2-210ENST00000584400 LINC00473A8K010 186 aa21.24■□□□□ 0.99
SMARCD2-210ENST00000584400 CNIH1O95406 144 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms