RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 TUSC2O75896 110 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 HLA-DQB1P01920 261 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 ELK1P19419 428 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 RORCP51449 518 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 RPS16P62249 146 aaKnown RBP19.5■□□□□ 0.71
TTC39C-209ENST00000584250 C1QL4Q86Z23 238 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 BVESQ8NE79 360 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 DDB2Q92466 427 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 CLCC1Q96S66 551 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 OR51J1Q9H342 316 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 PARP11Q9NR21 331 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 NOTCH3Q9UM47 2321 aa19.5■□□□□ 0.71
TTC39C-209ENST00000584250 RBBP9O75884 186 aa19.49■□□□□ 0.71
TTC39C-209ENST00000584250 IGLV2-23P01705 113 aa19.49■□□□□ 0.71
TTC39C-209ENST00000584250 APOA2P02652 100 aa19.49■□□□□ 0.71
TTC39C-209ENST00000584250 IGF1P05019 195 aa19.49■□□□□ 0.71
TTC39C-209ENST00000584250 DUTP33316 252 aaKnown RBP19.49■□□□□ 0.71
TTC39C-209ENST00000584250 LUMP51884 338 aaPredicted RBP19.49■□□□□ 0.71
TTC39C-209ENST00000584250 PDPNQ86YL7 162 aa19.49■□□□□ 0.71
TTC39C-209ENST00000584250 CLVS1Q8IUQ0 354 aaPredicted RBP19.49■□□□□ 0.71
TTC39C-209ENST00000584250 METTL1Q9UBP6 276 aaKnown RBP19.49■□□□□ 0.71
TTC39C-209ENST00000584250 APOA1P02647 267 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 RPLP1P05386 114 aaKnown RBP19.48■□□□□ 0.71
TTC39C-209ENST00000584250 AADACP22760 399 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 ARPC4P59998 168 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 RPL23AP62750 156 aaKnown RBP19.48■□□□□ 0.71
TTC39C-209ENST00000584250 RPL30P62888 115 aaKnown RBP19.48■□□□□ 0.71
TTC39C-209ENST00000584250 SLC35B1P78383 322 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 CX3CL1P78423 397 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 OR4F17Q8NGA8 305 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 OR4F4Q96R69 305 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 GPHA2Q96T91 129 aa19.48■□□□□ 0.71
TTC39C-209ENST00000584250 MRPS7Q9Y2R9 242 aaKnown RBP19.48■□□□□ 0.71
TTC39C-209ENST00000584250 SRRM4A7MD48 611 aaKnown RBP19.47■□□□□ 0.71
TTC39C-209ENST00000584250 SLC25A17O43808 307 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 EGR2P11161 476 aaPredicted RBP19.47■□□□□ 0.71
TTC39C-209ENST00000584250 FCGR2CP31995 323 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 THBS3P49746 956 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 PLGLAQ15195 96 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 ZNF645Q8N7E2 425 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 FLYWCH2Q96CP2 140 aaKnown RBP19.47■□□□□ 0.71
TTC39C-209ENST00000584250 RNF5Q99942 180 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 ANAPC10Q9UM13 185 aa19.47■□□□□ 0.71
TTC39C-209ENST00000584250 TEX38Q6PEX7 206 aa19.46■□□□□ 0.71
TTC39C-209ENST00000584250 ACOT12Q8WYK0 555 aa19.46■□□□□ 0.71
TTC39C-209ENST00000584250 FAM103A1Q9BTL3 118 aaKnown RBP19.46■□□□□ 0.71
TTC39C-209ENST00000584250 RBMX2Q9Y388 322 aaKnown RBP19.46■□□□□ 0.71
TTC39C-209ENST00000584250 G3V4G9 280 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 OR5H8P0DN80 308 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 PF4V1P10720 104 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 ZNF182P17025 639 aaPredicted RBP19.45■□□□□ 0.7
TTC39C-209ENST00000584250 VDAC1P21796 283 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 PPIFP30405 207 aaKnown RBP19.45■□□□□ 0.7
TTC39C-209ENST00000584250 CBX5P45973 191 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 SSBP2P81877 361 aaPredicted RBP19.45■□□□□ 0.7
TTC39C-209ENST00000584250 PJVKQ0ZLH3 352 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 EIF4EBP1Q13541 118 aaPredicted RBP19.45■□□□□ 0.7
TTC39C-209ENST00000584250 ETV3LQ6ZN32 361 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 SNX29P2Q8IUI4 249 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 OR5AP2Q8NGF4 316 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 TSNAXQ99598 290 aaKnown RBP19.45■□□□□ 0.7
TTC39C-209ENST00000584250 KLK15Q9H2R5 256 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 IFT46Q9NQC8 304 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 CCL28Q9NRJ3 127 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 NECAP2Q9NVZ3 263 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 ZNF580Q9UK33 172 aa19.45■□□□□ 0.7
TTC39C-209ENST00000584250 CA2P00918 260 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 IGHG4P01861 327 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 CRYGBP07316 175 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 PRSS3P35030 304 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 RFX2P48378 723 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 TMEM177Q53S58 311 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 C19orf54Q5BKX5 351 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 OR2B11Q5JQS5 317 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 C8orf86Q6ZUL3 223 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 COMMD1Q8N668 190 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 HARBI1Q96MB7 349 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 CMTM3Q96MX0 182 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 A3GALT2U3KPV4 340 aa19.44■□□□□ 0.7
TTC39C-209ENST00000584250 TRAV41A0A0B4J266 112 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 ARPC1BO15143 372 aaKnown RBP19.43■□□□□ 0.7
TTC39C-209ENST00000584250 SOX15O60248 233 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 CRYZL1O95825 349 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 PPYP01298 95 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 RPL5P46777 297 aaKnown RBP19.43■□□□□ 0.7
TTC39C-209ENST00000584250 DEFA6Q01524 100 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 FOXE3Q13461 319 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 CDK10Q15131 360 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 ECSCRQ19T08 205 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 MRGPRG-AS1Q2M3A8 158 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 ZNF660Q6AZW8 331 aaPredicted RBP19.43■□□□□ 0.7
TTC39C-209ENST00000584250 LYSMD2Q8IV50 215 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 RNF152Q8N8N0 203 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 KLHL30-AS1Q8NEE0 82 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 GPX8Q8TED1 209 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 SECTM1Q8WVN6 248 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 DUX3Q96PT4 197 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 MIXL1Q9H2W2 232 aa19.43■□□□□ 0.7
TTC39C-209ENST00000584250 FAM25AB3EWG3 89 aa19.42■□□□□ 0.7
TTC39C-209ENST00000584250 FAM25CB3EWG5 89 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms