RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 REC114Q7Z4M0 266 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 H1FOOQ8IZA3 346 aaPredicted RBP15.98■□□□□ 0.15
SS18-224ENST00000584083 FLYWCH2Q96CP2 140 aaKnown RBP15.98■□□□□ 0.15
SS18-224ENST00000584083 CLCC1Q96S66 551 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 DCSTAMPQ9H295 470 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 GAB2Q9UQC2 676 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 TGP01266 2768 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 CCL24O00175 119 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 FCN1O00602 326 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 PSMB8P28062 276 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 PPIFP30405 207 aaKnown RBP15.97■□□□□ 0.15
SS18-224ENST00000584083 RAB25P57735 213 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 CX3CL1P78423 397 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 ECSCRQ19T08 205 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 RAX2Q96IS3 184 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 A3GALT2U3KPV4 340 aa15.97■□□□□ 0.15
SS18-224ENST00000584083 TRAV18A0A075B6X5 111 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 J3QRK9 145 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 CTXN2P0C2S0 81 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 LSM3P62310 102 aaKnown RBP15.96■□□□□ 0.15
SS18-224ENST00000584083 NDPQ00604 133 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 CBX3Q13185 183 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 DEFB136Q30KP8 78 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 SLC25A38Q96DW6 304 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 YIPF6Q96EC8 236 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 P2RX4Q99571 388 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 KLK15Q9H2R5 256 aa15.96■□□□□ 0.15
SS18-224ENST00000584083 SLC25A17O43808 307 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 SSX5O60225 188 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 SPDEFO95238 335 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 TGFBR1P36897 503 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 CROCCP3Q8IVE0 287 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 DIABLOQ9NR28 239 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 FBXO7Q9Y3I1 522 aa15.95■□□□□ 0.14
SS18-224ENST00000584083 A0A1W2PN81 502 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 TMEM127O75204 238 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 IGLV1-40P01703 118 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 NFYAP23511 347 aaPredicted RBP15.94■□□□□ 0.14
SS18-224ENST00000584083 CHRNA7P36544 502 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 TAGLNQ01995 201 aaKnown RBP15.94■□□□□ 0.14
SS18-224ENST00000584083 TMEM267Q0VDI3 215 aaPredicted RBP15.94■□□□□ 0.14
SS18-224ENST00000584083 RTL8BQ17RB0 113 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 CNIH2Q6PI25 160 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 PPP1R27Q86WC6 154 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 BVESQ8NE79 360 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 C4orf3Q8WVX3 66 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 C5orf30Q96GV9 206 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 MCRIP2Q9BUT9 160 aaKnown RBP15.94■□□□□ 0.14
SS18-224ENST00000584083 GPR61Q9BZJ8 451 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 AURKAIP1Q9NWT8 199 aaPredicted RBP15.94■□□□□ 0.14
SS18-224ENST00000584083 SPATA2Q9UM82 520 aa15.94■□□□□ 0.14
SS18-224ENST00000584083 A0A0A6YYH2 397 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 A6NJ64 397 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 CA2P00918 260 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 RPS19P39019 145 aaKnown RBP15.93■□□□□ 0.14
SS18-224ENST00000584083 LUMP51884 338 aaPredicted RBP15.93■□□□□ 0.14
SS18-224ENST00000584083 ZNF562Q6V9R5 426 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 MINDY2Q8NBR6 621 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 MRAPQ8TCY5 172 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 DPF1Q92782 380 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 ADTRPQ96IZ2 230 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 UBE2E2Q96LR5 201 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 HARBI1Q96MB7 349 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 TPSG1Q9NRR2 321 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 ANXA10Q9UJ72 324 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 FOXA2Q9Y261 457 aaPredicted RBP15.93■□□□□ 0.14
SS18-224ENST00000584083 OR2W1Q9Y3N9 320 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 NUBP2Q9Y5Y2 271 aa15.93■□□□□ 0.14
SS18-224ENST00000584083 SHOXO15266 292 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 RRASP10301 218 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 EGR2P11161 476 aaPredicted RBP15.92■□□□□ 0.14
SS18-224ENST00000584083 LGALS7P47929 136 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 RAB9AP51151 201 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 CRIP2P52943 208 aaPredicted RBP15.92■□□□□ 0.14
SS18-224ENST00000584083 UNQ5815/PRO19632Q6UWF5 114 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 ZNF491Q8N8L2 437 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 MYOZ3Q8TDC0 251 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 FAM103A1Q9BTL3 118 aaKnown RBP15.92■□□□□ 0.14
SS18-224ENST00000584083 VSIG4Q9Y279 399 aa15.92■□□□□ 0.14
SS18-224ENST00000584083 CNIH1O95406 144 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 HOXD3P31249 432 aaPredicted RBP15.91■□□□□ 0.14
SS18-224ENST00000584083 ARPC4P59998 168 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 GNB1P62873 340 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 FXYD3Q14802 87 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 ACTBL2Q562R1 376 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 C19orf54Q5BKX5 351 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 TCTEX1D1Q8N7M0 179 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 GRPEL2Q8TAA5 225 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 ARPC1AQ92747 370 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 OR5B12Q96R08 314 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 AUNIPQ9H7T9 357 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 GNB4Q9HAV0 340 aa15.91■□□□□ 0.14
SS18-224ENST00000584083 PRKDCP78527 4128 aaKnown RBP15.91■□□□□ 0.14
SS18-224ENST00000584083 SOX15O60248 233 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 IGLV2-23P01705 113 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 HLA-DQB1P01920 261 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 DUTP33316 252 aaKnown RBP15.9■□□□□ 0.14
SS18-224ENST00000584083 KIAA0141Q14154 515 aaPredicted RBP15.9■□□□□ 0.14
SS18-224ENST00000584083 AKIRIN2Q53H80 203 aa15.9■□□□□ 0.14
SS18-224ENST00000584083 TMEM177Q53S58 311 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms