RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 C16orf45Q96MC5 204 aaPredicted RBP1.56□□□□□ -2.16
COPS3-217ENST00000583160 OR8B4Q96RC9 309 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 ZNF607Q96SK3 696 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 KCNS3Q9BQ31 491 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 PRSS27Q9BQR3 290 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 WFDC6Q9BQY6 131 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 C1orf50Q9BV19 199 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 C1QTNF6Q9BXI9 259 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 TMEM59Q9BXS4 323 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 C16orf95Q9H693 158 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 METTL17Q9H7H0 456 aaPredicted RBP1.56□□□□□ -2.16
COPS3-217ENST00000583160 RMND5AQ9H871 391 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 PALMDQ9NP74 551 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 MED29Q9NX70 200 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 VAPAQ9P0L0 249 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 MYEF2Q9P2K5 600 aaKnown RBP1.56□□□□□ -2.16
COPS3-217ENST00000583160 KAAG1Q9UBP8 84 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 NUP50Q9UKX7 468 aa1.56□□□□□ -2.16
COPS3-217ENST00000583160 VWFP04275 2813 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 A0A0U1RQV1 116 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TRAPPC13A5PLN9 417 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 C5orf63A6NC05 138 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 OR6C6A6NF89 314 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 IQCF6A8MYZ5 107 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 CLDN25C9JDP6 229 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 LYNX1G3V0Z9 82 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TRAPPC2LH3BP13 241 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 BPY2O14599 106 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 PHYHO14832 338 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 UBDO15205 165 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 OR5F1O95221 314 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 FARS2O95363 451 aaKnown RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 CPSF4O95639 269 aaKnown RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 RAB3DO95716 219 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 RAB36O95755 333 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 LHBP01229 141 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 IGHV1-46P01743 117 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 HLA-HP01893 362 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 CD74P04233 296 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 LYNX1P0DP58 116 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 OTX1P32242 354 aaPredicted RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 SRP14P37108 136 aaKnown RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 AQP2P41181 271 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 RORCP51449 518 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 LSM6P62312 80 aaKnown RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 VSNL1P62760 191 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 CBX1P83916 185 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 CDK6Q00534 326 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 PSG4Q00888 419 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 ZNF92Q03936 586 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 STX3Q13277 289 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 PMS2P3Q13401 168 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 SLC9A3R2Q15599 337 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 DGUOKQ16854 277 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TBC1D28Q2M2D7 210 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 KCTD21Q4G0X4 260 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 C9orf135Q5VTT2 229 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 METTL21CQ5VZV1 264 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TTC23Q5W5X9 447 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TMEM53Q6P2H8 277 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 C16orf87Q6PH81 154 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 ARL9Q6T311 187 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 LRRN1Q6UXK5 716 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TEX43Q6ZNM6 134 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 SLC35D2Q76EJ3 337 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 FAM122BQ7Z309 247 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 ZNF101Q8IZC7 436 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 C10orf111Q8N326 155 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 SPICQ8N5J4 248 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 C3orf56Q8N813 242 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 LY6G5BQ8NDX9 201 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 SLC30A7Q8NEW0 376 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 ATP6V1C2Q8NEY4 427 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 GPR32P1Q8NGA4 272 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 KLF14Q8TD94 323 aaPredicted RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 FAM3DQ96BQ1 224 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 FLYWCH2Q96CP2 140 aaKnown RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 CHMP6Q96FZ7 201 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 GPX7Q96SL4 187 aaPredicted RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 ZBTB18Q99592 522 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 CDCA4Q9BXL8 241 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 OR2H1Q9GZK4 316 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TXNIPQ9H3M7 391 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 SAV1Q9H4B6 383 aaPredicted RBP1.55□□□□□ -2.16
COPS3-217ENST00000583160 ANKRD19PQ9H560 264 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TMEM27Q9HBJ8 222 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TMEM165Q9HC07 324 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 DYNLRB1Q9NP97 96 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TAAR3PQ9P1P4 343 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 CD300AQ9UGN4 299 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 POFUT2Q9Y2G5 429 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 FIS1Q9Y3D6 152 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 N6AMT1Q9Y5N5 214 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 NPTNQ9Y639 398 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 TGP01266 2768 aa1.55□□□□□ -2.16
COPS3-217ENST00000583160 SORL1Q92673 2214 aa1.54□□□□□ -2.16
COPS3-217ENST00000583160 IGKV1D-43A0A0B4J1Z2 117 aa1.54□□□□□ -2.16
COPS3-217ENST00000583160 A0A1W2PRG6 482 aa1.54□□□□□ -2.16
COPS3-217ENST00000583160 TMEM120BA0PK00 339 aa1.54□□□□□ -2.16
COPS3-217ENST00000583160 CLPSL1A2RUU4 121 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms