RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 CBX3Q13185 183 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 LIN54Q6MZP7 749 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 MZT2AQ6P582 158 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 CLVS1Q8IUQ0 354 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 AP3S1Q92572 193 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 C5orf30Q96GV9 206 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 TSNAXQ99598 290 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 PARP11Q9NR21 331 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 NECAP2Q9NVZ3 263 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 MRPS7Q9Y2R9 242 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 OR2W1Q9Y3N9 320 aa9.93□□□□□ -0.82
SMARCE1-218ENST00000582955 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 FAM25AB3EWG3 89 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 FAM25CB3EWG5 89 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 FAM25GB3EWG6 89 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 APOA1P02647 267 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 RTL8BQ17RB0 113 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 COMMD1Q8N668 190 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 ZNF645Q8N7E2 425 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 BVESQ8NE79 360 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 FLYWCH2Q96CP2 140 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 RNF5Q99942 180 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 OR51J1Q9H342 316 aa9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 METTL1Q9UBP6 276 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-218ENST00000582955 CMYA5Q8N3K9 4069 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 VWFP04275 2813 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 IGHV7-81A0A0B4J1V7 117 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 IGKV1D-13A0A0B4J2D9 117 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 ATP6V0E1O15342 81 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 NOL3O60936 208 aaKnown RBP9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 TUSC2O75896 110 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 SPDEFO95238 335 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 HLA-DQB1P01920 261 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 OR5H8P0DN80 308 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 IGKV1-13P0DP09 117 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 ZNF182P17025 639 aaPredicted RBP9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 ELK1P19419 428 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 FCGR2CP31995 323 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 PRSS3P35030 304 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 TAGLNQ01995 201 aaKnown RBP9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 PSG5Q15238 335 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 TEX38Q6PEX7 206 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 SNX29P2Q8IUI4 249 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 ABHD5Q8WTS1 349 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 SNAPC3Q92966 411 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 ADTRPQ96IZ2 230 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 HARBI1Q96MB7 349 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 CMTM3Q96MX0 182 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 CLCC1Q96S66 551 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 WSB1Q9Y6I7 421 aa9.91□□□□□ -0.82
SMARCE1-218ENST00000582955 NUDT19A8MXV4 375 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 SHOXO15266 292 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 SLC25A17O43808 307 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 SLC22A5O76082 557 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 PF4P02776 101 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 IGF1P05019 195 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 RRASP10301 218 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 AADACP22760 399 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 DUTP33316 252 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 RPL5P46777 297 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 RPL23AP62750 156 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 SPCS2Q15005 226 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 CDK10Q15131 360 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 CXorf66Q5JRM2 361 aaPredicted RBP9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 KCTD9Q7L273 389 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 OR5AP2Q8NGF4 316 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 RAB2BQ8WUD1 216 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 SECTM1Q8WVN6 248 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 A3GALT2U3KPV4 340 aa9.9□□□□□ -0.82
SMARCE1-218ENST00000582955 TRAV41A0A0B4J266 112 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 LINC00473A8K010 186 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 G3V318 75 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 FCN1O00602 326 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 CRYZL1O95825 349 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 CA2P00918 260 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 PPYP01298 95 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 FXYD4P59646 89 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 CX3CL1P78423 397 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 NDPQ00604 133 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 FOXE3Q13461 319 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 ECSCRQ19T08 205 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 OR2B11Q5JQS5 317 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 ZNF660Q6AZW8 331 aaPredicted RBP9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 LCNL1Q6ZST4 164 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 KLHL30-AS1Q8NEE0 82 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 DCUN1D5Q9BTE7 237 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 TPSG1Q9NRR2 321 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 ZFP57Q9NU63 452 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 EHFQ9NZC4 300 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 PRELID3BQ9Y3B1 194 aa9.89□□□□□ -0.83
SMARCE1-218ENST00000582955 RGS5O15539 181 aa9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 FCGR3BO75015 233 aa9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 IGHG4P01861 327 aa9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 PMP2P02689 132 aa9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 ELANEP08246 267 aa9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 LGALS7P47929 136 aa9.88□□□□□ -0.83
SMARCE1-218ENST00000582955 TMBIM6P55061 237 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms