RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ZNF134P52741 427 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
MKS1-211ENST00000581761 UTF1Q5T230 341 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 OR10A7Q8NGE5 316 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 NEU4Q8WWR8 484 aaPredicted RBP12.05□□□□□ -0.48
MKS1-211ENST00000581761 ZNF714Q96N38 554 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 GSX2Q9BZM3 304 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
MKS1-211ENST00000581761 CACNG5Q9UF02 275 aa12.05□□□□□ -0.48
MKS1-211ENST00000581761 RPUSD1Q9UJJ7 312 aaKnown RBP12.05□□□□□ -0.48
MKS1-211ENST00000581761 RAMP3O60896 148 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 PITX3O75364 302 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 S1PR2O95136 353 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 IGHV2-70P01814 119 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 DANCRP0C864 163 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 DAOP14920 347 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 CCL3L1P16619 93 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 DUTP33316 252 aaKnown RBP12.04□□□□□ -0.48
MKS1-211ENST00000581761 ID3Q02535 119 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 IZUMO4Q1ZYL8 232 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 RPL39P5Q59GN2 51 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 CT45A1Q5HYN5 189 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 AVPI1Q5T686 147 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 TMEM200BQ69YZ2 307 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.04□□□□□ -0.48
MKS1-211ENST00000581761 ZNF439Q8NDP4 499 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 CT45A3Q8NHU0 189 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 STOML3Q8TAV4 291 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 C11orf1Q9H5F2 150 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 UBTD1Q9HAC8 227 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 FBXL17Q9UF56 701 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 GAB2Q9UQC2 676 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 MMP24Q9Y5R2 645 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 DSCAML1Q8TD84 2053 aa12.04□□□□□ -0.48
MKS1-211ENST00000581761 LINC00862A6NCI5 91 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 MMP9P14780 707 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 KIR2DS2P43631 304 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 BRWD1-AS2P59051 145 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
MKS1-211ENST00000581761 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
MKS1-211ENST00000581761 NCR3LG1Q68D85 454 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 Q6ZRM9 215 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 LYG1Q8N1E2 194 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 PHYHIPLQ96FC7 376 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 SMIM3Q9BZL3 60 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 ARID1AO14497 2285 aa12.03□□□□□ -0.48
MKS1-211ENST00000581761 CELSR1Q9NYQ6 3014 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 SAA2-SAA4A0A096LPE2 208 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 A0A1W2PPR1 153 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 FAM24AA6NFZ4 105 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 FCGR3BO75015 233 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 FSTL3O95633 263 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 KRASP01116 189 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 SAA2P0DJI9 122 aaPredicted RBP12.02□□□□□ -0.49
MKS1-211ENST00000581761 S100A1P23297 94 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 G6PCP35575 357 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 TMEM33P57088 247 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 LINC00205P59089 165 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 CLEC9AQ6UXN8 241 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 BAP18Q8IXM2 172 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 OR2C3Q8N628 320 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 CD300LFQ8TDQ1 290 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 RAB39BQ96DA2 213 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 BSCL2Q96G97 398 aaPredicted RBP12.02□□□□□ -0.49
MKS1-211ENST00000581761 TIMD4Q96H15 378 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 S1PR3Q99500 378 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 LAMP3Q9UQV4 416 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
MKS1-211ENST00000581761 TRBV23-1A0A0A0MS06 115 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 IGSF23A1L1A6 192 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 RAB29O14966 203 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 PPIHO43447 177 aaKnown RBP12.01□□□□□ -0.49
MKS1-211ENST00000581761 CHST1O43916 411 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 PROP1O75360 226 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 LY6HO94772 140 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 THBS3P49746 956 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 CAV2P51636 162 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 KRTAP10-9P60411 292 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 EWSR1Q01844 656 aaKnown RBP eCLIP12.01□□□□□ -0.49
MKS1-211ENST00000581761 FAM74A1Q5RGS3 127 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
MKS1-211ENST00000581761 COMMD7Q86VX2 200 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 RAB1CQ92928 201 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 SLC25A31Q9H0C2 315 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 SLC25A32Q9H2D1 315 aa12.01□□□□□ -0.49
MKS1-211ENST00000581761 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
MKS1-211ENST00000581761 A6NNC1 897 aa12□□□□□ -0.49
MKS1-211ENST00000581761 KIAA1324LA8MWY0 1029 aaPredicted RBP12□□□□□ -0.49
MKS1-211ENST00000581761 TOR1AO14656 332 aa12□□□□□ -0.49
MKS1-211ENST00000581761 HPRT1P00492 218 aa12□□□□□ -0.49
MKS1-211ENST00000581761 GAPDHP04406 335 aaKnown RBP12□□□□□ -0.49
MKS1-211ENST00000581761 NMBP08949 121 aa12□□□□□ -0.49
MKS1-211ENST00000581761 P0C879 139 aa12□□□□□ -0.49
MKS1-211ENST00000581761 DLX6P56179 175 aa12□□□□□ -0.49
MKS1-211ENST00000581761 ERVFRD-1P60508 538 aa12□□□□□ -0.49
MKS1-211ENST00000581761 RPL23AP62750 156 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms