RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MPZL2O60487 215 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 KRT75O95678 551 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 LINC00614P0C842 121 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 RD3LP0DJH9 198 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C8orf88P0DMB2 117 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 IGHV3-30-3P0DP02 117 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 CRYBB3P26998 211 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 ADORA1P30542 326 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 MAGEA12P43365 314 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 SERPINB10P48595 397 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 CDC34P49427 236 aaPredicted RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 PSMB3P49720 205 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 RPL14P50914 215 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 AP2S1P53680 142 aaPredicted RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 H2BFSP57053 126 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 DAD1P61803 113 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 UBE2IP63279 158 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C1DQ13901 141 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 BATFQ16520 125 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 MAPK14Q16539 360 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TBC1D28Q2M2D7 210 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 DNAL1Q4LDG9 190 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 CCDC122Q5T0U0 273 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 PTRHD1Q6GMV3 140 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TNFAIP8L2Q6P589 184 aaPredicted RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 DNM1P34Q6PK57 102 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 RASL11AQ6T310 242 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 DRAM2Q6UX65 266 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C2orf91Q6ZV80 131 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 FAM19A5Q7Z5A7 132 aaPredicted RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 BLIDQ8IZY5 108 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C10orf126Q8N4M7 172 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 PIGXQ8TBF5 258 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 RNASEH2CQ8TDP1 164 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C16orf78Q8WTQ4 265 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 DDI1Q8WTU0 396 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 CYGBQ8WWM9 190 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 FGF13Q92913 245 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TLCD1Q96CP7 247 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 OPTNQ96CV9 577 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 MS4A6EQ96DS6 147 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 CMTM5Q96DZ9 223 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 PACRGQ96M98 296 aaPredicted RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 OR7D2Q96RA2 312 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 EBNA1BP2Q99848 306 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 RETNLBQ9BQ08 111 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TMEM208Q9BTX3 173 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TIMM21Q9BVV7 248 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 MND1Q9BWT6 205 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 BBS2Q9BXC9 721 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 SLC22A4Q9H015 551 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 SMDT1Q9H4I9 107 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C11orf1Q9H5F2 150 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 IMP3Q9NV31 184 aaKnown RBP0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 DOK5Q9P104 306 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 LINC00527Q9UJ94 153 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TP53TG1Q9Y2A0 90 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 ALG5Q9Y673 324 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 MYH7BA7E2Y1 1941 aa0.59□□□□□ -2.32
SMCHD1-206ENST00000581631 CLUHO75153 1309 aa0.59□□□□□ -2.32
SMCHD1-206ENST00000581631 MALRD1Q5VYJ5 2156 aa0.59□□□□□ -2.32
SMCHD1-206ENST00000581631 DENND4CQ5VZ89 1909 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 PLXND1Q9Y4D7 1925 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 NPATQ14207 1427 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 TRAV8-1A0A0A6YYK1 113 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 A0A1B0GV50 99 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 DHRS12A0PJE2 317 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 GRIFINA4D1Z8 144 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 LINC00862A6NCI5 91 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 FABP12A6NFH5 140 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 LRRN3E7EW58 273 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 SMLR1H3BR10 107 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 J3QQQ9 107 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 M0R036 132 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 ATP8B1O43520 1251 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 NIPSNAP2O75323 286 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 NDUFS6O75380 124 aaKnown RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 STK16O75716 305 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 PSMG1O95456 288 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 ATP6V1G2O95670 118 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 HBZP02008 142 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 CD7P09564 240 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 CCL3P10147 92 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 UCHL3P15374 230 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 MIPP30301 263 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 OPRM1P35372 400 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 SLCO1A2P46721 670 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 OR1E2P47887 323 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 HINT1P49773 126 aaPredicted RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 RAP1GDS1P52306 607 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 UBE2G2P60604 165 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 SNAP25P60880 206 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 RPL26P61254 145 aaKnown RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC35A2P78381 396 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 HOXC5Q00444 222 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 PDK2Q15119 407 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 UAP1Q16222 522 aaPredicted RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 RGS21Q2M5E4 152 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 HLA-DRB5Q30154 266 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM31Q5JXX7 168 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms