RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 RAB6AP20340 208 aa16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 GADD45AP24522 165 aa16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 ECI1P42126 302 aa16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 GABARAPL2P60520 117 aa16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 TMEM267Q0VDI3 215 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 ZNF562Q6V9R5 426 aa16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 TCTEX1D1Q8N7M0 179 aa16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 TSNAXQ99598 290 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-216ENST00000581108 SORL1Q92673 2214 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 TRBV6-7A0A0A0MS04 114 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 SMIM30A4D0T7 59 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 ATP6V1G2O95670 118 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 CA2P00918 260 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 APOA2P02652 100 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 HIST1H1DP16402 221 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 DCTN2Q13561 401 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 AKIRIN2Q53H80 203 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 UNQ5815/PRO19632Q6UWF5 114 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 PDPNQ86YL7 162 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 LFNGQ8NES3 379 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 OR10J5Q8NHC4 309 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 DCUN1D4Q92564 292 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 FLYWCH2Q96CP2 140 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 CABLES2Q9BTV7 478 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 OR2D2Q9H210 308 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 TPSG1Q9NRR2 321 aa16.49■□□□□ 0.23
CSNK1D-216ENST00000581108 METTL21EPA6NDL7 271 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 SLC25A17O43808 307 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 MRPS14O60783 128 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 GALP22466 123 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 ACTBL2Q562R1 376 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 UBE2UQ5VVX9 321 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 SPARTQ8N0X7 666 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 MS4A10Q96PG2 267 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 SLC35D1Q9NTN3 355 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 SDHAF2Q9NX18 166 aa16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 ELF5Q9UKW6 265 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 LSM4Q9Y4Z0 139 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-216ENST00000581108 SPDEFO95238 335 aa16.47■□□□□ 0.23
CSNK1D-216ENST00000581108 ARFRP1Q13795 201 aa16.47■□□□□ 0.23
CSNK1D-216ENST00000581108 ATG5Q9H1Y0 275 aa16.47■□□□□ 0.23
CSNK1D-216ENST00000581108 IGKV1D-8A0A087WSZ0 117 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 ARPC1BO15143 372 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 PSMB9P28065 219 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 TALDO1P37837 337 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 SLURP1P55000 103 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 FXYD3Q14802 87 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 ARPC1AQ92747 370 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 DLX4Q92988 240 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 C5orf30Q96GV9 206 aa16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 TXNL4BQ9NX01 149 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-216ENST00000581108 IGHV4OR15-8A0A075B7B6 117 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 A0A087WW49 117 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 LINC01619G3V211 115 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 OVOL1O14753 267 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 DIRAS3O95661 229 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 IGLV2-23P01705 113 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 IGHV3-11P01762 117 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 LGALS1P09382 135 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 FGF9P31371 208 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 INSL3P51460 131 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 PJVKQ0ZLH3 352 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 PYHIN1Q6K0P9 492 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 GRPEL2Q8TAA5 225 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 GINS4Q9BRT9 223 aa16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 ZNF256Q9Y2P7 627 aaPredicted RBP16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 RBM7Q9Y580 266 aaKnown RBP16.45■□□□□ 0.22
CSNK1D-216ENST00000581108 LGALS7P47929 136 aa16.44■□□□□ 0.22
CSNK1D-216ENST00000581108 TPPP2P59282 170 aa16.44■□□□□ 0.22
CSNK1D-216ENST00000581108 SSBP2P81877 361 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-216ENST00000581108 SRSF7Q16629 238 aaKnown RBP eCLIP16.44■□□□□ 0.22
CSNK1D-216ENST00000581108 CDNFQ49AH0 187 aa16.44■□□□□ 0.22
CSNK1D-216ENST00000581108 BVESQ8NE79 360 aa16.44■□□□□ 0.22
CSNK1D-216ENST00000581108 NOTOA8MTQ0 251 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 CNIH1O95406 144 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 CRYGBP07316 175 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 CD40LGP29965 261 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 Q6ZS49 121 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 H1FOOQ8IZA3 346 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 OR5T1Q8NG75 326 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 RHOVQ96L33 236 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 STUB1Q9UNE7 303 aa16.43■□□□□ 0.22
CSNK1D-216ENST00000581108 TENM3Q9P273 2699 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 TNCP24821 2201 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 SRRM4A7MD48 611 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 SAP30O75446 220 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 LY86O95711 162 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 TRGV3P03979 118 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 TMEM177Q53S58 311 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 ZNF429Q86V71 674 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 FCGR1BQ92637 280 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 HARBI1Q96MB7 349 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 ST6GALNAC5Q9BVH7 336 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 Q9H521 79 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 SLA2Q9H6Q3 261 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 ZNF355PQ9NSJ1 428 aa16.42■□□□□ 0.22
CSNK1D-216ENST00000581108 SHOXO15266 292 aa16.41■□□□□ 0.22
CSNK1D-216ENST00000581108 HSPB1P04792 205 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms