RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 PCGF1Q9BSM1 259 aa4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RANBP3Q9H6Z4 567 aaPredicted RBP4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 BARX1Q9HBU1 254 aaPredicted RBP4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CACNG5Q9UF02 275 aa4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RCL1Q9Y2P8 373 aaKnown RBP4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LSM5Q9Y4Y9 91 aaKnown RBP4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ICE1Q9Y2F5 2266 aa4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CHD6Q8TD26 2715 aa4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 SPTBN1Q01082 2364 aaKnown RBP4.99□□□□□ -1.61
RNU4ATAC-201ENST00000580972 HRNRQ86YZ3 2850 aaPredicted RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 A0A087X0M5 115 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 A0A1B0GX30 115 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ODF3BA8MYP8 253 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 K7EPK0 472 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 M0R1W7 72 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RAB29O14966 203 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ARPC5O15511 151 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ENSAO43768 121 aaKnown RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 MPC2O95563 127 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 TMEM50AO95807 157 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CRYZL1O95825 349 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 IFNA21P01568 189 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 IGLV1-47P01700 117 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 IGKV1-16P04430 117 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ARG1P05089 322 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 IAPPP10997 89 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CD24P25063 80 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CNTFRP26992 372 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 S100GP29377 79 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 AKR1C2P52895 323 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 AP2S1P53680 142 aaPredicted RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 DVL1P1P54792 670 aaPredicted RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RPS16P62249 146 aaKnown RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 POLR2GP62487 172 aaKnown RBP eCLIP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 IFITM2Q01629 132 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 MSMO1Q15800 293 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 TMEM30BQ3MIR4 351 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LGALSLQ3ZCW2 172 aaPredicted RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ZNF66Q6ZN08 573 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CIARTQ8N365 385 aaPredicted RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 FAM71E2Q8N5Q1 922 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LINC00311Q8N616 119 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ZBTB34Q8NCN2 500 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 OR9G1Q8NH87 305 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RNASE11Q8TAA1 199 aaKnown RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LHX4Q969G2 390 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 PPP1R14BQ96C90 147 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 R3HDM4Q96D70 268 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RAB39BQ96DA2 213 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 Q96MF0 132 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 HSD17B10Q99714 261 aaKnown RBP4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CLEC7AQ9BXN2 247 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 C11orf1Q9H5F2 150 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RAB9BQ9NP90 201 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 TPSG1Q9NRR2 321 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 SLC35D1Q9NTN3 355 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 HSPB11Q9Y547 144 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 HILPDAQ9Y5L2 63 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 FAM208BQ5VWN6 2430 aa4.98□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RAI1Q7Z5J4 1906 aaPredicted RBP4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ARFGEF3Q5TH69 2177 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RNF222A6NCQ9 220 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 RNF212BA8MTL3 300 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LY6LH3BQJ8 138 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 BUB1B-PAK6H3BSN5 160 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 NDUFS8O00217 210 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 TOR1AO14656 332 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 GPR37O15354 613 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 SSSCA1O60232 199 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 TSC22D2O75157 780 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 PITX3O75364 302 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 AVPP01185 164 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 USF1P22415 310 aaPredicted RBP4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 PRTN3P24158 256 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 THBS3P49746 956 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 SRPXP78539 464 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 CATR1Q13166 79 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 MIDNQ504T8 468 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 FAM120AOSQ5T036 256 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 TPTE2P1Q5T6R2 138 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 KIR3DL3Q8N743 410 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 WFDC11Q8NEX6 87 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 DMBX1Q8NFW5 382 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 OR13D1Q8NGV5 346 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 DCUN1D4Q92564 292 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 IL22RA2Q969J5 263 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 S1PR3Q99500 378 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 QTRT1Q9BXR0 403 aaKnown RBP4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 NMES1Q9C002 83 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 BEX4Q9NWD9 120 aaPredicted RBP4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 GAB2Q9UQC2 676 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 INSIG2Q9Y5U4 225 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 DSCAMO60469 2012 aa4.97□□□□□ -1.61
RNU4ATAC-201ENST00000580972 FLNCQ14315 2725 aa4.96□□□□□ -1.61
RNU4ATAC-201ENST00000580972 LRRK2Q5S007 2527 aa4.96□□□□□ -1.61
RNU4ATAC-201ENST00000580972 MYO18BQ8IUG5 2567 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms