RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ZNF383Q8NA42 475 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 BPIFB6Q8NFQ5 453 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 NICN1Q9BSH3 213 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 PARP12Q9H0J9 701 aaKnown RBP13.68□□□□□ -0.22
MKS1-209ENST00000580127 PLGRKTQ9HBL7 147 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 Q9N2K0 584 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 SIGLEC8Q9NYZ4 499 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 OR1A1Q9P1Q5 309 aa13.68□□□□□ -0.22
MKS1-209ENST00000580127 NKX1-2Q9UD57 310 aaPredicted RBP13.68□□□□□ -0.22
MKS1-209ENST00000580127 TRDCB7Z8K6 153 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 M0R1X1 148 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 AIREO43918 545 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 SCTP09683 121 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 RRASP10301 218 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 UNC119Q13432 240 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 TPBGQ13641 420 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 FAM89BQ8N5H3 189 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 OR2K2Q8NGT1 345 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 PHB2Q99623 299 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 CMSS1Q9BQ75 279 aaKnown RBP13.67□□□□□ -0.22
MKS1-209ENST00000580127 CENPOQ9BU64 300 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 TINAGL1Q9GZM7 467 aaPredicted RBP13.67□□□□□ -0.22
MKS1-209ENST00000580127 GAR1Q9NY12 217 aaKnown RBP13.67□□□□□ -0.22
MKS1-209ENST00000580127 COA4Q9NYJ1 87 aa13.67□□□□□ -0.22
MKS1-209ENST00000580127 SOCS1O15524 211 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 CD37P11049 281 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 QRFPP83859 136 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 RTL8BQ17RB0 113 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 ZNF343Q6P1L6 599 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 OR4A4PQ8NGN8 299 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 RDH8Q9NYR8 311 aa13.66□□□□□ -0.22
MKS1-209ENST00000580127 SHISA3A0PJX4 238 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 EBAG9O00559 213 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 SHOXO15266 292 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 PROP1O75360 226 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 OR2A4O95047 310 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 SPHARQ15513 63 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 FAM209BQ5JX69 171 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 RNLSQ5VYX0 342 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 BVESQ8NE79 360 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 OR56B1Q8NGI3 324 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 OR10J5Q8NHC4 309 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 CYYR1Q96J86 154 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 HARBI1Q96MB7 349 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 LPAR5Q9H1C0 372 aa13.65□□□□□ -0.22
MKS1-209ENST00000580127 RBM7Q9Y580 266 aaKnown RBP13.65□□□□□ -0.22
MKS1-209ENST00000580127 MPPED1O15442 326 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 ARL6IP5O75915 188 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 TPPPO94811 219 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 UCHL1P09936 223 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 PSMD7P51665 324 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 INSL4Q14641 139 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 IL34Q6ZMJ4 242 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 LAX1Q8IWV1 398 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 HDHD3Q9BSH5 251 aaPredicted RBP13.64□□□□□ -0.23
MKS1-209ENST00000580127 SLC2A8Q9NY64 477 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 SCN3BQ9NY72 215 aa13.64□□□□□ -0.23
MKS1-209ENST00000580127 MSGN1A6NI15 193 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 PTGES3LE9PB15 166 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 SLC17A2O00624 439 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 ACTL6BO94805 426 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 CSN3P07498 182 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 CD3GP09693 182 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 PJVKQ0ZLH3 352 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 P2RY14Q15391 338 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 MED22Q15528 200 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 TRAM1Q15629 374 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 RAB11BQ15907 218 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 TEX45Q8NA69 505 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 ARHGAP5-AS1Q96IT6 56 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 ADTRPQ96IZ2 230 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 PECRQ9BY49 303 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 VCXQ9H320 206 aa13.63□□□□□ -0.23
MKS1-209ENST00000580127 A0A0A6YYD4 124 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 BET1O15155 118 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 CREBL2O60519 120 aaPredicted RBP13.62□□□□□ -0.23
MKS1-209ENST00000580127 TUSC2O75896 110 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 CDK1P06493 297 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 OR9G9P0C7N8 305 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 LINC00205P59089 165 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 ATP5G2Q06055 141 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 TMEM177Q53S58 311 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 UFD1Q92890 307 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 KCNK15Q9H427 330 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 FKBP14Q9NWM8 211 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 CEPT1Q9Y6K0 416 aa13.62□□□□□ -0.23
MKS1-209ENST00000580127 HUWE1Q7Z6Z7 4374 aaKnown RBP13.61□□□□□ -0.23
MKS1-209ENST00000580127 FAM223BA6NKX1 122 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 FABP7O15540 132 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 DIRAS3O95661 229 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 CRYGBP07316 175 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 GNAO1P09471 354 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 PSMA1P25786 263 aaKnown RBP13.61□□□□□ -0.23
MKS1-209ENST00000580127 TMEM50BP56557 158 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 FAM223AQ8IWN6 122 aa13.61□□□□□ -0.23
MKS1-209ENST00000580127 FBLIM1Q8WUP2 373 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms