RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 RNF167Q9H6Y7 350 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 PPP1R3EQ9H7J1 279 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 ZNF702PQ9H963 129 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 WDR76Q9H967 626 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 ADGRL4Q9HBW9 690 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 A4GALTQ9NPC4 353 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 EXOSC4Q9NPD3 245 aaKnown RBP1.95□□□□□ -2.1
SNORD53-201ENST00000579969 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.95□□□□□ -2.1
SNORD53-201ENST00000579969 MRPS18AQ9NVS2 196 aaKnown RBP1.95□□□□□ -2.1
SNORD53-201ENST00000579969 TXNL4BQ9NX01 149 aaKnown RBP1.95□□□□□ -2.1
SNORD53-201ENST00000579969 NDUFB11Q9NX14 153 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 B3GAT1Q9P2W7 334 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 ONECUT1Q9UBC0 465 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 MRM2Q9UI43 246 aaKnown RBP1.95□□□□□ -2.1
SNORD53-201ENST00000579969 ZNF391Q9UJN7 358 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 HHLA2Q9UM44 414 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 A4GNTQ9UNA3 340 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 LSM2Q9Y333 95 aaKnown RBP1.95□□□□□ -2.1
SNORD53-201ENST00000579969 TMED7Q9Y3B3 224 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 CDH10Q9Y6N8 788 aa1.95□□□□□ -2.1
SNORD53-201ENST00000579969 SRRM2Q9UQ35 2752 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 PKHD1P08F94 4074 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TNCP24821 2201 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 DMBT1Q9UGM3 2413 aaPredicted RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TRAV8-7A0A075B6U6 113 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 LOC100509620A0A075B734 347 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 A0A087WUJ7 227 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 MEIKINA0A087WXM9 373 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 A0A0D9SG52 128 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TRDV1A0A1B0GX56 115 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 KANTRA0A1W2PQU2 76 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 C7orf66A4D0T2 115 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 PSMB11A5LHX3 300 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 ANKRD30BLA7E2S9 258 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 COLCA2A8K830 154 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 IFNL4K9M1U5 179 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 CORTO00230 105 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GPR31O00270 319 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 NPFFO15130 113 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 SIVA1O15304 175 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 ZNF207O43670 478 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 SYNGR1O43759 233 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 CHST1O43916 411 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GNG7O60262 68 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 ENTPD6O75354 484 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 CA11O75493 328 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 HSBP1O75506 76 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RGS11O94810 467 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 OR6A2O95222 327 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 FSTL3O95633 263 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 IFNA1P01562 189 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 PMP2P02689 132 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 HLA-DPB1P04440 258 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 HMGN2P05204 90 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 IL6RP08887 468 aaPredicted RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GIPP09681 153 aaPredicted RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 FRMD6-AS1P0C7T7 363 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 OR13C7P0DN81 318 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 IRF2P14316 349 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 B4GALT1P15291 398 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 SDC1P18827 310 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 PMCHP20382 165 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 NFYAP23511 347 aaPredicted RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 AZGP1P25311 298 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 DUSP1P28562 367 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 OR10J1P30954 320 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 BRS3P32247 399 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 SNCAP37840 140 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RPL3P39023 403 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GABRA2P47869 451 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RPL29P47914 159 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 THBS3P49746 956 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 HTR6P50406 440 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 POLR2HP52434 150 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 CRISP3P54108 245 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TAS2R43P59537 309 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TAS2R30P59541 319 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 S100A10P60903 97 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RAP2BP61225 183 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 BLCAPP62952 87 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 MRPS34P82930 218 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RPL24P83731 157 aaKnown RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GUCA2AQ02747 115 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 PLP2Q04941 152 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 MXD1Q05195 221 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 MZT1Q08AG7 82 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RAB40BQ12829 278 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 PSG7Q13046 419 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GAGE5Q13069 117 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 GAGE6Q13070 117 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RAB32Q13637 225 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 RGNQ15493 299 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 ZNF141Q15928 474 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 BATFQ16520 125 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TMEM183BQ1AE95 376 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TBC1D28Q2M2D7 210 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 SNAI3Q3KNW1 292 aa1.94□□□□□ -2.1
SNORD53-201ENST00000579969 LGALSLQ3ZCW2 172 aaPredicted RBP1.94□□□□□ -2.1
SNORD53-201ENST00000579969 TMEM177Q53S58 311 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms