RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 PLGLAQ15195 96 aa18.83■□□□□ 0.6
LIMD2-207ENST00000579329 TSNAXQ99598 290 aaKnown RBP18.83■□□□□ 0.6
LIMD2-207ENST00000579329 FBXL15Q9H469 300 aa18.83■□□□□ 0.6
LIMD2-207ENST00000579329 SPDEFO95238 335 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 HLA-DQB1P01920 261 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 APOA1P02647 267 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 IGKV1-16P04430 117 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 EIF4EP06730 217 aaKnown RBP18.82■□□□□ 0.6
LIMD2-207ENST00000579329 OR5H8P0DN80 308 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 RPS16P62249 146 aaKnown RBP18.82■□□□□ 0.6
LIMD2-207ENST00000579329 CBX3Q13185 183 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 ZNF645Q8N7E2 425 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 FLYWCH2Q96CP2 140 aaKnown RBP18.82■□□□□ 0.6
LIMD2-207ENST00000579329 ADTRPQ96IZ2 230 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 OR51J1Q9H342 316 aa18.82■□□□□ 0.6
LIMD2-207ENST00000579329 IGHV7-81A0A0B4J1V7 117 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 J3QRK9 145 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 SLC22A5O76082 557 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 PF4V1P10720 104 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 MZT2AQ6P582 158 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 TEX38Q6PEX7 206 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 AP3S1Q92572 193 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 IFT46Q9NQC8 304 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 NECAP2Q9NVZ3 263 aa18.81■□□□□ 0.6
LIMD2-207ENST00000579329 TUSC2O75896 110 aa18.8■□□□□ 0.6
LIMD2-207ENST00000579329 RRASP10301 218 aa18.8■□□□□ 0.6
LIMD2-207ENST00000579329 PSG5Q15238 335 aa18.8■□□□□ 0.6
LIMD2-207ENST00000579329 RTL8BQ17RB0 113 aa18.8■□□□□ 0.6
LIMD2-207ENST00000579329 PARP11Q9NR21 331 aa18.8■□□□□ 0.6
LIMD2-207ENST00000579329 ZFP57Q9NU63 452 aa18.8■□□□□ 0.6
LIMD2-207ENST00000579329 METTL1Q9UBP6 276 aaKnown RBP18.8■□□□□ 0.6
LIMD2-207ENST00000579329 SMIM31A0A1B0GVY4 71 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 MEIS3P1A6NDR6 274 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 ATP6V0E1O15342 81 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 FCER2P06734 321 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 ZNF182P17025 639 aaPredicted RBP18.79■□□□□ 0.6
LIMD2-207ENST00000579329 DUTP33316 252 aaKnown RBP18.79■□□□□ 0.6
LIMD2-207ENST00000579329 RPL23AP62750 156 aaKnown RBP18.79■□□□□ 0.6
LIMD2-207ENST00000579329 CFHR3Q02985 330 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 BVESQ8NE79 360 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 SNAPC3Q92966 411 aa18.79■□□□□ 0.6
LIMD2-207ENST00000579329 IGKV1D-13A0A0B4J2D9 117 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 HPGDSO60760 199 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 ELANEP08246 267 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 IGKV1-13P0DP09 117 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 PRSS3P35030 304 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 LGALS7P47929 136 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 FOXE3Q13461 319 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 CXorf66Q5JRM2 361 aaPredicted RBP18.78■□□□□ 0.6
LIMD2-207ENST00000579329 ZNF660Q6AZW8 331 aaPredicted RBP18.78■□□□□ 0.6
LIMD2-207ENST00000579329 CLVS1Q8IUQ0 354 aaPredicted RBP18.78■□□□□ 0.6
LIMD2-207ENST00000579329 OR5AP2Q8NGF4 316 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 DDB2Q92466 427 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 ANAPC10Q9UM13 185 aa18.78■□□□□ 0.6
LIMD2-207ENST00000579329 RBMX2Q9Y388 322 aaKnown RBP18.78■□□□□ 0.6
LIMD2-207ENST00000579329 IGHG4P01861 327 aa18.77■□□□□ 0.6
LIMD2-207ENST00000579329 PF4P02776 101 aa18.77■□□□□ 0.6
LIMD2-207ENST00000579329 FCGR2CP31995 323 aa18.77■□□□□ 0.6
LIMD2-207ENST00000579329 CX3CL1P78423 397 aa18.77■□□□□ 0.6
LIMD2-207ENST00000579329 TMEM177Q53S58 311 aa18.77■□□□□ 0.6
LIMD2-207ENST00000579329 HARBI1Q96MB7 349 aa18.77■□□□□ 0.6
LIMD2-207ENST00000579329 MRPS7Q9Y2R9 242 aaKnown RBP18.77■□□□□ 0.6
LIMD2-207ENST00000579329 TRAV41A0A0B4J266 112 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 LINC00473A8K010 186 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 SLC25A17O43808 307 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 ELK1P19419 428 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 AADACP22760 399 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 RPL5P46777 297 aaKnown RBP18.76■□□□□ 0.59
LIMD2-207ENST00000579329 NDPQ00604 133 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 CDK10Q15131 360 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 RNF152Q8N8N0 203 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 RAB2BQ8WUD1 216 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 BCL7BQ9BQE9 202 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 WSB1Q9Y6I7 421 aa18.76■□□□□ 0.59
LIMD2-207ENST00000579329 NUDT19A8MXV4 375 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 FAM25AB3EWG3 89 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 FAM25CB3EWG5 89 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 FAM25GB3EWG6 89 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 FCN1O00602 326 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 SHOXO15266 292 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 IGLV2-23P01705 113 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 SLC6A1P30531 599 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 KCTD9Q7L273 389 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 ABHD5Q8WTS1 349 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 CLCC1Q96S66 551 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 PRELID3BQ9Y3B1 194 aa18.75■□□□□ 0.59
LIMD2-207ENST00000579329 G3V318 75 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 CA2P00918 260 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 PPYP01298 95 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 IGLV2-14P01704 120 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 RPLP1P05386 114 aaKnown RBP18.74■□□□□ 0.59
LIMD2-207ENST00000579329 NAT1P18440 290 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 PPIFP30405 207 aaKnown RBP18.74■□□□□ 0.59
LIMD2-207ENST00000579329 CRIP2P52943 208 aaPredicted RBP18.74■□□□□ 0.59
LIMD2-207ENST00000579329 TMBIM6P55061 237 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 SPCS2Q15005 226 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 MSMO1Q15800 293 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 ZNF562Q6V9R5 426 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 KLHL30-AS1Q8NEE0 82 aa18.74■□□□□ 0.59
LIMD2-207ENST00000579329 HSD17B10Q99714 261 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms