RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 C5orf30Q96GV9 206 aa6.85□□□□□ -1.31
GGA3-207ENST00000578896 CMSS1Q9BQ75 279 aaKnown RBP6.85□□□□□ -1.31
GGA3-207ENST00000578896 URM1Q9BTM9 101 aaKnown RBP6.85□□□□□ -1.31
GGA3-207ENST00000578896 GHITMQ9H3K2 345 aa6.85□□□□□ -1.31
GGA3-207ENST00000578896 C8orf4Q9NR00 106 aa6.85□□□□□ -1.31
GGA3-207ENST00000578896 SLC35D1Q9NTN3 355 aa6.85□□□□□ -1.31
GGA3-207ENST00000578896 RDH8Q9NYR8 311 aa6.85□□□□□ -1.31
GGA3-207ENST00000578896 NKX1-2Q9UD57 310 aaPredicted RBP6.85□□□□□ -1.31
GGA3-207ENST00000578896 ZNF221Q9UK13 617 aa6.85□□□□□ -1.31
GGA3-207ENST00000578896 A0A075B6Q4 140 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 TRDCB7Z8K6 153 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 J3QRK9 145 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 SLC17A2O00624 439 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 ITGB1BP1O14713 200 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 CASQ2O14958 399 aaPredicted RBP6.84□□□□□ -1.31
GGA3-207ENST00000578896 BET1O15155 118 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 RBMXL2O75526 392 aaKnown RBP6.84□□□□□ -1.31
GGA3-207ENST00000578896 RBBP9O75884 186 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 CNIH1O95406 144 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 IGLV2-23P01705 113 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 TRBV12-3P01733 135 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 TFAP2AP05549 437 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 OR8U9P0C7N5 309 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 GSTT2P0CG29 244 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 GSTT2BP0CG30 244 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 IGHV4-30-4P0DP06 118 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 MOGAT2Q3SYC2 334 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 IGSF11Q5DX21 431 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 RNLSQ5VYX0 342 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 FAM89BQ8N5H3 189 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 TCTEX1D1Q8N7M0 179 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 POC5Q8NA72 575 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 EDARADDQ8WWZ3 215 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 FAM3DQ96BQ1 224 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 TSNAXQ99598 290 aaKnown RBP6.84□□□□□ -1.31
GGA3-207ENST00000578896 RIMS4Q9H426 269 aaPredicted RBP6.84□□□□□ -1.31
GGA3-207ENST00000578896 SCN3BQ9NY72 215 aa6.84□□□□□ -1.31
GGA3-207ENST00000578896 ZNF230Q9UIE0 474 aaPredicted RBP6.84□□□□□ -1.31
GGA3-207ENST00000578896 A0A0B4J203 849 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 TMEM272A0A1B0GTI8 110 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 C13orf42A0A1B0GVH6 325 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 SRRM4A7MD48 611 aaKnown RBP6.83□□□□□ -1.32
GGA3-207ENST00000578896 DENRO43583 198 aaKnown RBP6.83□□□□□ -1.32
GGA3-207ENST00000578896 APOA2P02652 100 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 CRYGBP07316 175 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 LYL1P12980 280 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 CALRP27797 417 aaKnown RBP6.83□□□□□ -1.32
GGA3-207ENST00000578896 CD40LGP29965 261 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 AQP4P55087 323 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 SYNJ2BPP57105 145 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 FABP5Q01469 135 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 PYHIN1Q6K0P9 492 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 IL34Q6ZMJ4 242 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 PDPNQ86YL7 162 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 BVESQ8NE79 360 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 NRG4Q8WWG1 115 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 PTX4Q96A99 478 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 RNF5Q99942 180 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 ELOVL1Q9BW60 279 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 CCDC90BQ9GZT6 254 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 OR2D2Q9H210 308 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 ZMAT4Q9H898 229 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 C12orf4Q9NQ89 552 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 SDHAF2Q9NX18 166 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 HSF4Q9ULV5 492 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 KCNK7Q9Y2U2 307 aa6.83□□□□□ -1.32
GGA3-207ENST00000578896 SHISA3A0PJX4 238 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 IZUMO1RA6ND01 250 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 LDLRAD4O15165 306 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 FABP7O15540 132 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 PRH1P02810 166 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 GNB3P16520 340 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 OR10A3P58181 314 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 TAGLNQ01995 201 aaKnown RBP6.82□□□□□ -1.32
GGA3-207ENST00000578896 TPBGQ13641 420 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 MRGPRG-AS1Q2M3A8 158 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 IDO2Q6ZQW0 420 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 HARBI1Q96MB7 349 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 SLA2Q9H6Q3 261 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 RANGRFQ9HD47 186 aaPredicted RBP6.82□□□□□ -1.32
GGA3-207ENST00000578896 PALMDQ9NP74 551 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 COA4Q9NYJ1 87 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 ELF5Q9UKW6 265 aaPredicted RBP6.82□□□□□ -1.32
GGA3-207ENST00000578896 STUB1Q9UNE7 303 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 SELENOKQ9Y6D0 94 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 V9GY05 133 aa6.82□□□□□ -1.32
GGA3-207ENST00000578896 IGKV1D-8A0A087WSZ0 117 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 SMIM30A4D0T7 59 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 MSGN1A6NI15 193 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 SHOXO15266 292 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 RGS10O43665 173 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 SPDEFO95238 335 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 FCGR3AP08637 254 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 DYRK1AQ13627 763 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 KLF5Q13887 457 aaPredicted RBP6.81□□□□□ -1.32
GGA3-207ENST00000578896 ADAMTSL5Q6ZMM2 481 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 OR56B1Q8NGI3 324 aa6.81□□□□□ -1.32
GGA3-207ENST00000578896 OR4A4PQ8NGN8 299 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms