RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 MBD6Q96DN6 1003 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 PLEKHA2Q9HB19 425 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 ZC4H2Q9NQZ6 224 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 NSG2Q9Y328 171 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 POMT1Q9Y6A1 747 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 A0A1W2PPH5 198 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 M0R1X1 148 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 PVALBP20472 110 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-218ENST00000578469 TMEM33P57088 247 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 RPL30P62888 115 aaKnown RBP13.94□□□□□ -0.18
SREBF1-218ENST00000578469 BTNL3Q6UXE8 466 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 SPAG16Q8N0X2 631 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF680Q8NEM1 530 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 OR8B3Q8NGG8 313 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 GPR146Q96CH1 333 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 NEIL1Q96FI4 390 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-218ENST00000578469 C5orf30Q96GV9 206 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 AQP10Q96PS8 301 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 OR8B2Q96RD0 313 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 ARPC5LQ9BPX5 153 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 IFI27L2Q9H2X8 130 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 CHODLQ9H9P2 273 aa13.94□□□□□ -0.18
SREBF1-218ENST00000578469 A0A1W2PPR1 153 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 RAB29O14966 203 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 KIR2DS2P43631 304 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 UBA52P62987 128 aaKnown RBP13.93□□□□□ -0.18
SREBF1-218ENST00000578469 CT45A1Q5HYN5 189 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 AVPI1Q5T686 147 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 FAM219AQ8IW50 185 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF439Q8NDP4 499 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 CT45A3Q8NHU0 189 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 ADTRPQ96IZ2 230 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 UBQLN2Q9UHD9 624 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 PRELID3BQ9Y3B1 194 aa13.93□□□□□ -0.18
SREBF1-218ENST00000578469 WRBO00258 174 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 SLC31A2O15432 143 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 FCN3O75636 299 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 F12P00748 615 aaPredicted RBP13.92□□□□□ -0.18
SREBF1-218ENST00000578469 IGKV1-39P01597 117 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 IGHV3-7P01780 117 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 IGKV1D-39P04432 117 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 CCL3L1P16619 93 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 EPHA1P21709 976 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 DUTP33316 252 aaKnown RBP13.92□□□□□ -0.18
SREBF1-218ENST00000578469 GNG10P50151 68 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF134P52741 427 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 DEFB113Q30KQ7 82 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 LYG1Q8N1E2 194 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 LEAP2Q969E1 77 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 S1PR3Q99500 378 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 RCL1Q9Y2P8 373 aaKnown RBP13.92□□□□□ -0.18
SREBF1-218ENST00000578469 MMP24Q9Y5R2 645 aa13.92□□□□□ -0.18
SREBF1-218ENST00000578469 HRNRQ86YZ3 2850 aaPredicted RBP13.92□□□□□ -0.18
SREBF1-218ENST00000578469 C17orf98A8MV24 154 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 F5H0A9 414 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-218ENST00000578469 TAAR5O14804 337 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 MMP9P14780 707 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 RPL12P30050 165 aaKnown RBP13.91□□□□□ -0.18
SREBF1-218ENST00000578469 P2RY1P47900 373 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 THBS3P49746 956 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 EFNA4P52798 201 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 VAMP2P63027 116 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF816Q0VGE8 651 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-218ENST00000578469 OR2B11Q5JQS5 317 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 GPR157Q5UAW9 335 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 SLC25A48Q6ZT89 311 aaKnown RBP13.91□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF471Q9BX82 626 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-218ENST00000578469 JMJD1CQ15652 2540 aa13.91□□□□□ -0.18
SREBF1-218ENST00000578469 LINC00473A8K010 186 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 RBFOX2O43251 390 aaKnown RBP eCLIP13.9□□□□□ -0.182e-6■■□□□ 12.8
SREBF1-218ENST00000578469 GPR137BO60478 399 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 MMP23AO75900 390 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 LY6HO94772 140 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 IGKV1-5P01602 117 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 HKR1P10072 659 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 CDKN1AP38936 164 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 RAB14P61106 215 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 ID3Q02535 119 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 EXOSC2Q13868 293 aaKnown RBP13.9□□□□□ -0.18
SREBF1-218ENST00000578469 RPL39P5Q59GN2 51 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF841Q6ZN19 808 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 VPS13CQ709C8 3753 aa13.9□□□□□ -0.18
SREBF1-218ENST00000578469 DSCAML1Q8TD84 2053 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 A0A0G2JRQ6 117 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 A0A1W2PPE3 182 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 KCNAB3O43448 404 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 RAMP3O60896 148 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 FCGR3BO75015 233 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 PITX3O75364 302 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 S1PR2O95136 353 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 HPRT1P00492 218 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 HTR2BP41595 481 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 GPR6P46095 362 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-218ENST00000578469 EIF5AP63241 154 aaKnown RBP13.89□□□□□ -0.19
SREBF1-218ENST00000578469 CXorf66Q5JRM2 361 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-218ENST00000578469 WDR25Q64LD2 544 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-218ENST00000578469 NCR3LG1Q68D85 454 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 CLEC9AQ6UXN8 241 aa13.89□□□□□ -0.19
SREBF1-218ENST00000578469 C8orf31Q8N9H6 132 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms