RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HSF4	Q9ULV5	492 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SELENOK	Q9Y6D0	94 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SMAD5-AS1	Q9Y6J3	95 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	A3GALT2	U3KPV4	340 aa		3.37	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HERC2	O95714	4834 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TRBV6-7	A0A0A0MS04	114 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TRBV9	A0A0B4J1U6	114 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IGKV1D-13	A0A0B4J2D9	117 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RBMY1B	A6NDE4	496 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RBMY1E	A6NEQ0	496 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR5H14	A6NHG9	310 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TEX22	C9J3V5	150 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PTGES3L	E9PB15	166 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329		H3BUI4	141 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	BMPR1B	O00238	502 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RAB29	O14966	203 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RRP9	O43818	475 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SSX5	O60225	188 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SAP30	O75446	220 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	BPNT1	O95861	308 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PRH1	P02810	166 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HSPB1	P04792	205 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FCGR3A	P08637	254 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RBMY1D	P0C7P1	496 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	APELA	P0DMC3	54 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IGKV1-13	P0DP09	117 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CPE	P16870	476 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CRHBP	P24387	322 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CEACAM6	P40199	344 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	VEGFC	P49767	419 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	INSL3	P51460	131 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TAS2R43	P59537	309 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FXYD3	Q14802	87 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HAGH	Q16775	308 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KLK9	Q2XQG4	91 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	C2orf76	Q3KRA6	126 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TMEM177	Q53S58	311 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ACTBL2	Q562R1	376 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZFAND6	Q6FIF0	208 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF343	Q6P1L6	599 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TRAT1	Q6PIZ9	186 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	UNQ5815/PRO19632	Q6UWF5	114 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IDO2	Q6ZQW0	420 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF429	Q86V71	674 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	H1FOO	Q8IZA3	346 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	STX19	Q8N4C7	294 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF555	Q8NEP9	628 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR2AK2	Q8NG84	335 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR6M1	Q8NGM8	313 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KCNG3	Q8TAE7	436 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	DPF1	Q92782	380 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GPHA2	Q96T91	129 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GON7	Q9BXV9	100 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	METTL1	Q9UBP6	276 aa	Known RBP	3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KLK9	Q9UKQ9	250 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	WASHC3	Q9Y3C0	194 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KMT2A	Q03164	3969 aa		3.36	□□□□□ -1.87
PPP4R1-209	ENST00000578329	DNAH10	Q8IVF4	4471 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IRGM	A1A4Y4	181 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SMIM30	A4D0T7	59 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ANKRD34B	A5PLL1	514 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TRDC	B7Z8K6	153 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329		M0R1X1	148 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RGS11	O94810	467 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TRGV3	P03979	118 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	IL6R	P08887	468 aa	Predicted RBP	3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CD7	P09564	240 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR8U9	P0C7N5	309 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	UBB	P0CG47	229 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	OR5H8	P0DN80	308 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PTHLH	P12272	177 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GNB3	P16520	340 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	DUT	P33316	252 aa	Known RBP	3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SYNJ2BP	P57105	145 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TPPP2	P59282	170 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TAGLN	Q01995	201 aa	Known RBP	3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	SRSF7	Q16629	238 aa	Known RBP eCLIP	3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	PRSS8	Q16651	343 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HSD17B12	Q53GQ0	312 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RBM48	Q5RL73	367 aa	Known RBP	3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HES5	Q5TA89	166 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	MS4A15	Q8N5U1	240 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	POC5	Q8NA72	575 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	BVES	Q8NE79	360 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	GRPEL2	Q8TAA5	225 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FAM3D	Q96BQ1	224 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CCDC140	Q96MF4	163 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	FANCD2OS	Q96PS1	177 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	NEDD4L	Q96PU5	975 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	S100A13	Q99584	98 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	RNF5	Q99942	180 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KRTAP9-9	Q9BYP9	154 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	KRTAP9-4	Q9BYQ2	154 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	TINAGL1	Q9GZM7	467 aa	Predicted RBP	3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	CST11	Q9H112	138 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	HIPK2	Q9H2X6	1198 aa		3.35	□□□□□ -1.87
PPP4R1-209	ENST00000578329	ZNF430	Q9H8G1	570 aa	Predicted RBP	3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms