RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PF4V1P10720 104 aa18.48■□□□□ 0.55
SNF8-217ENST00000576353 CBX3Q13185 183 aa18.48■□□□□ 0.55
SNF8-217ENST00000576353 GVQW1Q8N7I0 195 aa18.48■□□□□ 0.55
SNF8-217ENST00000576353 FBXL15Q9H469 300 aa18.48■□□□□ 0.55
SNF8-217ENST00000576353 IGHV7-81A0A0B4J1V7 117 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 SMIM31A0A1B0GVY4 71 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 SPDEFO95238 335 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 APOA1P02647 267 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 RRASP10301 218 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 PTHLHP12272 177 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 TAS2R20P59543 309 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 PSG5Q15238 335 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 ZNF660Q6AZW8 331 aaPredicted RBP18.47■□□□□ 0.55
SNF8-217ENST00000576353 ZNF645Q8N7E2 425 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 AP3S1Q92572 193 aa18.47■□□□□ 0.55
SNF8-217ENST00000576353 J3QRK9 145 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 ELANEP08246 267 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 LGALS7P47929 136 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 RPL23AP62750 156 aaKnown RBP18.46■□□□□ 0.55
SNF8-217ENST00000576353 FOXE3Q13461 319 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 RTL8BQ17RB0 113 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 MZT2AQ6P582 158 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 C5orf30Q96GV9 206 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 IFT46Q9NQC8 304 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 PARP11Q9NR21 331 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 NECAP2Q9NVZ3 263 aa18.46■□□□□ 0.55
SNF8-217ENST00000576353 METTL1Q9UBP6 276 aaKnown RBP18.46■□□□□ 0.55
SNF8-217ENST00000576353 TUSC2O75896 110 aa18.45■□□□□ 0.54
SNF8-217ENST00000576353 IGHG4P01861 327 aa18.45■□□□□ 0.54
SNF8-217ENST00000576353 EIF4EP06730 217 aaKnown RBP18.45■□□□□ 0.54
SNF8-217ENST00000576353 SLC6A1P30531 599 aa18.45■□□□□ 0.54
SNF8-217ENST00000576353 DUTP33316 252 aaKnown RBP18.45■□□□□ 0.54
SNF8-217ENST00000576353 CFHR3Q02985 330 aa18.45■□□□□ 0.54
SNF8-217ENST00000576353 CXorf66Q5JRM2 361 aaPredicted RBP18.45■□□□□ 0.54
SNF8-217ENST00000576353 ATP6V0E1O15342 81 aa18.44■□□□□ 0.54
SNF8-217ENST00000576353 ZNF182P17025 639 aaPredicted RBP18.44■□□□□ 0.54
SNF8-217ENST00000576353 PRSS3P35030 304 aa18.44■□□□□ 0.54
SNF8-217ENST00000576353 CX3CL1P78423 397 aa18.44■□□□□ 0.54
SNF8-217ENST00000576353 BVESQ8NE79 360 aa18.44■□□□□ 0.54
SNF8-217ENST00000576353 OR5AP2Q8NGF4 316 aa18.44■□□□□ 0.54
SNF8-217ENST00000576353 TRAV41A0A0B4J266 112 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 FCN1O00602 326 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 PF4P02776 101 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 FCER2P06734 321 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 FCGR2CP31995 323 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 TMEM177Q53S58 311 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 RNF152Q8N8N0 203 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 DDB2Q92466 427 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 SNAPC3Q92966 411 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 MRPS7Q9Y2R9 242 aaKnown RBP18.43■□□□□ 0.54
SNF8-217ENST00000576353 RBMX2Q9Y388 322 aaKnown RBP18.43■□□□□ 0.54
SNF8-217ENST00000576353 WSB1Q9Y6I7 421 aa18.43■□□□□ 0.54
SNF8-217ENST00000576353 IGKV1D-13A0A0B4J2D9 117 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 MEIS3P1A6NDR6 274 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 NUDT19A8MXV4 375 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 HPGDSO60760 199 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 IGKV1-13P0DP09 117 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 ZNF562Q6V9R5 426 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 HARBI1Q96MB7 349 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 CLCC1Q96S66 551 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 PRELID3BQ9Y3B1 194 aa18.42■□□□□ 0.54
SNF8-217ENST00000576353 LINC00473A8K010 186 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 G3V318 75 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 SHOXO15266 292 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 SLC25A17O43808 307 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 RPLP1P05386 114 aaKnown RBP18.41■□□□□ 0.54
SNF8-217ENST00000576353 ELK1P19419 428 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 PPIFP30405 207 aaKnown RBP18.41■□□□□ 0.54
SNF8-217ENST00000576353 RPL5P46777 297 aaKnown RBP18.41■□□□□ 0.54
SNF8-217ENST00000576353 TMEM267Q0VDI3 215 aaPredicted RBP18.41■□□□□ 0.54
SNF8-217ENST00000576353 CDK10Q15131 360 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 TMEM65Q6PI78 240 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 CLVS1Q8IUQ0 354 aaPredicted RBP18.41■□□□□ 0.54
SNF8-217ENST00000576353 ZNF695Q8IW36 515 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 WFDC9Q8NEX5 89 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 ABHD5Q8WTS1 349 aa18.41■□□□□ 0.54
SNF8-217ENST00000576353 HSD17B10Q99714 261 aaKnown RBP18.41■□□□□ 0.54
SNF8-217ENST00000576353 IGLV2-14P01704 120 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 IGLV2-23P01705 113 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 AADACP22760 399 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 PSMB8P28062 276 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 CRIP2P52943 208 aaPredicted RBP18.4■□□□□ 0.54
SNF8-217ENST00000576353 MSMO1Q15800 293 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 PPP1R27Q86WC6 154 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 KLHL30-AS1Q8NEE0 82 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 RAB2BQ8WUD1 216 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 GIMAP1Q8WWP7 306 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 ANAPC10Q9UM13 185 aa18.4■□□□□ 0.54
SNF8-217ENST00000576353 FAM25AB3EWG3 89 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 FAM25CB3EWG5 89 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 FAM25GB3EWG6 89 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 CRYZL1O95825 349 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 CA2P00918 260 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 PPYP01298 95 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 NAT1P18440 290 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 CD33P20138 364 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 CDX1P47902 265 aaPredicted RBP18.39■□□□□ 0.53
SNF8-217ENST00000576353 TMBIM6P55061 237 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 TAS2R46P59540 309 aa18.39■□□□□ 0.53
SNF8-217ENST00000576353 NDPQ00604 133 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms