RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 EPHA8P29322 1005 aaPredicted RBP12.16□□□□□ -0.46
SMG6-215ENST00000574501 CTRLP40313 264 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 RNF151Q2KHN1 245 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 HLA-DRB5Q30154 266 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 KRTCAP3Q53RY4 240 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 C17orf82Q86X59 251 aaPredicted RBP12.16□□□□□ -0.46
SMG6-215ENST00000574501 PLXDC1Q8IUK5 500 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 CADM4Q8NFZ8 388 aa12.16□□□□□ -0.46
SMG6-215ENST00000574501 HYPMO75409 117 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 TIMP3P35625 211 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 CARD18P57730 90 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 SLC23A3Q6PIS1 610 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 UNQ5815/PRO19632Q6UWF5 114 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 OR5A2Q8NGI9 324 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 STARD4Q96DR4 205 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 ZNF552Q9H707 407 aaPredicted RBP12.15□□□□□ -0.46
SMG6-215ENST00000574501 ZNF391Q9UJN7 358 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 MMP17Q9ULZ9 603 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 TBL2Q9Y4P3 447 aaKnown RBP12.15□□□□□ -0.46
SMG6-215ENST00000574501 CABIN1Q9Y6J0 2220 aa12.15□□□□□ -0.46
SMG6-215ENST00000574501 SIRPB1O00241 398 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 SERPINA7P05543 415 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 HINT1P49773 126 aaPredicted RBP12.15□□□□□ -0.47
SMG6-215ENST00000574501 HNRNPA3P51991 378 aaKnown RBP12.15□□□□□ -0.47
SMG6-215ENST00000574501 KRTAP27-1Q3LI81 207 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 Q6ZS52 159 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 C1orf174Q8IYL3 243 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 LYG1Q8N1E2 194 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 OR10P1Q8NGE3 313 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 DEFB126Q9BYW3 111 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 WNT10AQ9GZT5 417 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 ZNF703Q9H7S9 590 aaPredicted RBP12.15□□□□□ -0.47
SMG6-215ENST00000574501 CD207Q9UJ71 328 aa12.15□□□□□ -0.47
SMG6-215ENST00000574501 TRAV24A0A0B4J272 114 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 SPINK4O60575 86 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 ZG16O60844 167 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 RAMP3O60896 148 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 GPX1P07203 203 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 CELA2AP08217 269 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 FKBP2P26885 142 aaKnown RBP12.14□□□□□ -0.47
SMG6-215ENST00000574501 G6PCP35575 357 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 CEACAM16Q2WEN9 425 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 ORAOV1Q8WV07 137 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 RNF2Q99496 336 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 UQCR10Q9UDW1 63 aa12.14□□□□□ -0.47
SMG6-215ENST00000574501 PIGBOS1A0A0B4J2F0 54 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 IGHV3-9P01782 118 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 PMCHP20382 165 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 KLF3P57682 345 aaPredicted RBP12.13□□□□□ -0.47
SMG6-215ENST00000574501 MKXQ8IYA7 352 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 ATOH7Q8N100 152 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 APOBEC3DQ96AK3 386 aaPredicted RBP12.13□□□□□ -0.47
SMG6-215ENST00000574501 APH1AQ96BI3 265 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 FOXB1Q99853 325 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 NRN1Q9NPD7 142 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
SMG6-215ENST00000574501 ZNF586Q9NXT0 402 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 DUX1O43812 170 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 IGHEP01854 428 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 EDDM3BP56851 147 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 ZNF816Q0VGE8 651 aaPredicted RBP12.13□□□□□ -0.47
SMG6-215ENST00000574501 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
SMG6-215ENST00000574501 KCNIP2Q9NS61 270 aa12.13□□□□□ -0.47
SMG6-215ENST00000574501 LMO7DNF2Z398 122 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 ZIC3O60481 467 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 CDKN1BP46527 198 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 AMTP48728 403 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 PSG7Q13046 419 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 UBE2V1Q13404 147 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 IGFBP7Q16270 282 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 QTRT1Q9BXR0 403 aaKnown RBP12.12□□□□□ -0.47
SMG6-215ENST00000574501 ITGB1BP1O14713 200 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 ZXDAP98168 799 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 MAJINQ3KP22 176 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 WDR74Q6RFH5 385 aaPredicted RBP12.12□□□□□ -0.47
SMG6-215ENST00000574501 CCDC74BQ96LY2 380 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 RCHY1Q96PM5 261 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 HSPB7Q9UBY9 170 aa12.12□□□□□ -0.47
SMG6-215ENST00000574501 LOC105371242A0A075B767 164 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 DKK1O94907 266 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 SYNGR4O95473 234 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 CCL3P10147 92 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 TDHQ8IZJ6 230 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 IL36BQ9NZH7 164 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 VPS13AQ96RL7 3174 aa12.11□□□□□ -0.47
SMG6-215ENST00000574501 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms