RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 LINC00473A8K010 186 aa19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 IL3RAP26951 378 aa19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 DUTP33316 252 aaKnown RBP19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 OR2B11Q5JQS5 317 aa19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 LDLRAD2Q5SZI1 272 aa19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 KCTD9Q7L273 389 aa19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 TCTEX1D2Q8WW35 142 aa19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 HSD17B10Q99714 261 aaKnown RBP19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 RANBP3Q9H6Z4 567 aaPredicted RBP19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 AMMECR1Q9Y4X0 333 aaPredicted RBP19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 FLNAP21333 2647 aaKnown RBP19.51■□□□□ 0.71
ATPAF1-213ENST00000574428 UBE2E1P51965 193 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 ZNF137PP52743 207 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 ANKRD55Q3KP44 614 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 LIN54Q6MZP7 749 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 ZNF66Q6ZN08 573 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 C12orf45Q8N5I9 185 aaPredicted RBP19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 GALNT14Q96FL9 552 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 KCNIP3Q9Y2W7 256 aa19.5■□□□□ 0.71
ATPAF1-213ENST00000574428 CENPVL3A0A0U1RRI6 287 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 RNF212BA8MTL3 300 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 G3V3Q6 166 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 GOSR2O14653 212 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 DUS4LO95620 317 aaKnown RBP19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 AVPP01185 164 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 GIPP09681 153 aaPredicted RBP19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 IFITM2Q01629 132 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 LHFPL4Q7Z7J7 247 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 OR2T35Q8NGX2 323 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 MRPL20Q9BYC9 149 aaKnown RBP19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 MYO9AB2RTY4 2548 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 IGHV3OR16-10A0A075B7F0 116 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 TRAV40A0A0B4J280 105 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 H0Y980 276 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 OR2A4O95047 310 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 HTR1DP28221 377 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 CATR1Q13166 79 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 C11orf88Q6PI97 169 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 OR11H4Q8NGC9 324 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 MITD1Q8WV92 249 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 OR2A7Q96R45 310 aa19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 LIN7CQ9NUP9 197 aaKnown RBP19.49■□□□□ 0.71
ATPAF1-213ENST00000574428 LY6LH3BQJ8 138 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 SIX6O95475 246 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 CT45A6P0DMU7 189 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 CT45A5P0DMU8 189 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 CT45A7P0DMV0 189 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 H2BFSP57053 126 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 TMEM187Q14656 261 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 GLYATL2Q8WU03 294 aa19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 WDR89Q96FK6 387 aaPredicted RBP19.48■□□□□ 0.71
ATPAF1-213ENST00000574428 ZNF469Q96JG9 3925 aaPredicted RBP19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 J3QLI3 93 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 LAMTOR1Q6IAA8 161 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 FAM71F2Q6NXP2 309 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 TGIF2LXQ8IUE1 241 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 ZNF383Q8NA42 475 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 TMEM222Q9H0R3 208 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 RAMP3O60896 148 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 BRWD1-AS2P59051 145 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 RAP2BP61225 183 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 Q5BKY6 102 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 RPEQ96AT9 228 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 RBMXL1Q96E39 390 aaKnown RBP19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 PHB2Q99623 299 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 DPM3Q9P2X0 92 aa19.47■□□□□ 0.71
ATPAF1-213ENST00000574428 OTOGQ6ZRI0 2925 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 LEUTXA8MZ59 168 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 IGHV4-38-2P0DP08 117 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 PAX6P26367 422 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 THBS3P49746 956 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 LGALS4P56470 323 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 TPTE2P1Q5T6R2 138 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 RUSC1-AS1Q66K80 236 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 C9orf62Q8N4C0 152 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 LHFPL5Q8TAF8 219 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 C17orf50Q8WW18 174 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 HILPDAQ9Y5L2 63 aa19.46■□□□□ 0.71
ATPAF1-213ENST00000574428 NPFFO15130 113 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 UCP1P25874 307 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 SAA4P35542 130 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 LIAT1Q6ZQX7 453 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 SPAG16Q8N0X2 631 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 PIP4P2Q8N4L2 257 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 COQ8AQ8NI60 647 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 GRPEL2Q8TAA5 225 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 DDB2Q92466 427 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 SVEP1Q4LDE5 3571 aa19.45■□□□□ 0.7
ATPAF1-213ENST00000574428 IGHV1-69DA0A0B4J2H0 117 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 IGHV1-69P01742 117 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 SERPINE2P07093 398 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 CEACAM3P40198 252 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 ZNF585BQ52M93 769 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 ADTRPQ96IZ2 230 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 NABP2Q9BQ15 211 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 FCGR3BO75015 233 aa19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 GAPDHP04406 335 aaKnown RBP19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 ZNF816Q0VGE8 651 aaPredicted RBP19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 KLF17Q5JT82 389 aaPredicted RBP19.44■□□□□ 0.7
ATPAF1-213ENST00000574428 MINOS1Q5TGZ0 78 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms