RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 C12orf4Q9NQ89 552 aa16.79■□□□□ 0.28
SNF8-216ENST00000573795 HSF4Q9ULV5 492 aa16.79■□□□□ 0.28
SNF8-216ENST00000573795 TNCP24821 2201 aa16.79■□□□□ 0.28
SNF8-216ENST00000573795 H3BUA1 57 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 CRYGBP07316 175 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 CD40LGP29965 261 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 DEFA5Q01523 94 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 KLF5Q13887 457 aaPredicted RBP16.78■□□□□ 0.28
SNF8-216ENST00000573795 RCN1Q15293 331 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 ANKRD13BQ86YJ7 626 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 ARHGAP5-AS1Q96IT6 56 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 THAP7Q9BT49 309 aaPredicted RBP16.78■□□□□ 0.28
SNF8-216ENST00000573795 ADAM30Q9UKF2 790 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 MGAT4AQ9UM21 535 aa16.78■□□□□ 0.28
SNF8-216ENST00000573795 ANKRD34BA5PLL1 514 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 SLC17A2O00624 439 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 ZP3P21754 424 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 SPHARQ15513 63 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 OGFRL1Q5TC84 451 aaPredicted RBP16.77■□□□□ 0.28
SNF8-216ENST00000573795 TMEM91Q6ZNR0 172 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 SGPP2Q8IWX5 399 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 C5orf30Q96GV9 206 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 URM1Q9BTM9 101 aaKnown RBP16.77■□□□□ 0.28
SNF8-216ENST00000573795 PECRQ9BY49 303 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 ZNF355PQ9NSJ1 428 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 RDH8Q9NYR8 311 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 ZNF221Q9UK13 617 aa16.77■□□□□ 0.28
SNF8-216ENST00000573795 C13orf42A0A1B0GVH6 325 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 M0R1X1 148 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 EBAG9O00559 213 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 APOA2P02652 100 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 ARSBP15848 533 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 MRGPRG-AS1Q2M3A8 158 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 PLAC9Q5JTB6 97 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 OR9G4Q8NGQ1 327 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 SLC35D1Q9NTN3 355 aa16.76■□□□□ 0.27
SNF8-216ENST00000573795 ALMS1Q8TCU4 4167 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 RBMXL2O75526 392 aaKnown RBP16.75■□□□□ 0.27
SNF8-216ENST00000573795 BRI3O95415 125 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 TRBV12-3P01733 135 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 VEGFCP49767 419 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 IRF3Q14653 427 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 LIPKQ5VXJ0 399 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 TMEM203Q969S6 136 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 ISOC1Q96CN7 298 aa16.75■□□□□ 0.27
SNF8-216ENST00000573795 CMSS1Q9BQ75 279 aaKnown RBP16.75■□□□□ 0.27
SNF8-216ENST00000573795 AK6Q9Y3D8 172 aaKnown RBP16.75■□□□□ 0.27
SNF8-216ENST00000573795 A0A0G2JLM5 398 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 TRDCB7Z8K6 153 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 CASQ2O14958 399 aaPredicted RBP16.74■□□□□ 0.27
SNF8-216ENST00000573795 CD3GP09693 182 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 CLDN12P56749 244 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 SYNJ2BPP57105 145 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 PLA2G7Q13093 441 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 DYRK1AQ13627 763 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 MED22Q15528 200 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 HAGHQ16775 308 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 MOGAT2Q3SYC2 334 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.74■□□□□ 0.27
SNF8-216ENST00000573795 TINAGL1Q9GZM7 467 aaPredicted RBP16.74■□□□□ 0.27
SNF8-216ENST00000573795 PLGRKTQ9HBL7 147 aa16.74■□□□□ 0.27
SNF8-216ENST00000573795 SRRM4A7MD48 611 aaKnown RBP16.73■□□□□ 0.27
SNF8-216ENST00000573795 PTGES3LE9PB15 166 aa16.73■□□□□ 0.27
SNF8-216ENST00000573795 CNIH1O95406 144 aa16.73■□□□□ 0.27
SNF8-216ENST00000573795 RPS25P62851 125 aaKnown RBP16.73■□□□□ 0.27
SNF8-216ENST00000573795 ZNF343Q6P1L6 599 aa16.73■□□□□ 0.27
SNF8-216ENST00000573795 SPATA25Q9BR10 227 aa16.73■□□□□ 0.27
SNF8-216ENST00000573795 SDHAF2Q9NX18 166 aa16.73■□□□□ 0.27
SNF8-216ENST00000573795 KCNK7Q9Y2U2 307 aa16.73■□□□□ 0.27
SNF8-216ENST00000573795 CSN3P07498 182 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 RAB11BQ15907 218 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 ADAMTSL5Q6ZMM2 481 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 OR4A4PQ8NGN8 299 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 UFD1Q92890 307 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 HARBI1Q96MB7 349 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 CABLES2Q9BTV7 478 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 OR2D2Q9H210 308 aa16.72■□□□□ 0.27
SNF8-216ENST00000573795 IZUMO1RA6ND01 250 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 LGALS7P47929 136 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 TPBGQ13641 420 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 TMEM177Q53S58 311 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 IGSF11Q5DX21 431 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 TMEM68Q96MH6 324 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 SIGLEC8Q9NYZ4 499 aa16.71■□□□□ 0.27
SNF8-216ENST00000573795 PEF1Q9UBV8 284 aaKnown RBP16.71■□□□□ 0.27
SNF8-216ENST00000573795 H0Y980 276 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 FABP7O15540 132 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 APELAP0DMC3 54 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 AADACP22760 399 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 SERPINB10P48595 397 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 C2orf76Q3KRA6 126 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 BVESQ8NE79 360 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 OR56B1Q8NGI3 324 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 FAM3DQ96BQ1 224 aa16.7■□□□□ 0.26
SNF8-216ENST00000573795 TRBV6-7A0A0A0MS04 114 aa16.69■□□□□ 0.26
SNF8-216ENST00000573795 TMEM272A0A1B0GTI8 110 aa16.69■□□□□ 0.26
SNF8-216ENST00000573795 BET1O15155 118 aa16.69■□□□□ 0.26
SNF8-216ENST00000573795 FCGR3AP08637 254 aa16.69■□□□□ 0.26
SNF8-216ENST00000573795 GSTT2P0CG29 244 aa16.69■□□□□ 0.26
SNF8-216ENST00000573795 GSTT2BP0CG30 244 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms