RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 COL7A1Q02388 2944 aa13.47□□□□□ -0.25
SMG6-212ENST00000573153 NUDT19A8MXV4 375 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 H7C2Y5 167 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 I3L521 148 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 IGKV1-16P04430 117 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 CLEC2LP0C7M8 214 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 TAGLNQ01995 201 aaKnown RBP13.46□□□□□ -0.25
SMG6-212ENST00000573153 TIMM50Q3ZCQ8 353 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 ZNF260Q3ZCT1 412 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 ZNF491Q8N8L2 437 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 DRAXINQ8NBI3 349 aaPredicted RBP13.46□□□□□ -0.25
SMG6-212ENST00000573153 OR8U1Q8NH10 309 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 C4orf3Q8WVX3 66 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 MAFIPQ8WZ33 124 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 TSNAXQ99598 290 aaKnown RBP13.46□□□□□ -0.25
SMG6-212ENST00000573153 OR2D2Q9H210 308 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 RHBDL2Q9NX52 303 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 WSB1Q9Y6I7 421 aa13.46□□□□□ -0.25
SMG6-212ENST00000573153 A0A087WXM4 84 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 A0A0A6YYH2 397 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 TRAV41A0A0B4J266 112 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 LOC100506127A0A0U1RQW1 187 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 A6NJ64 397 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 TRIM64CA6NLI5 447 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 TNFAIP8O95379 198 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 APOA2P02652 100 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 OR8U9P0C7N5 309 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 CX3CL1P78423 397 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 RUNX1Q01196 453 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 PSG5Q15238 335 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 TCTEX1D1Q8N7M0 179 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 UBE2E2Q96LR5 201 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 MCRIP2Q9BUT9 160 aaKnown RBP13.45□□□□□ -0.26
SMG6-212ENST00000573153 PARP11Q9NR21 331 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 TPSG1Q9NRR2 321 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 SDHAF2Q9NX18 166 aa13.45□□□□□ -0.26
SMG6-212ENST00000573153 TMEM235A6NFC5 223 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 M0R1X1 148 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 CTXN2P0C2S0 81 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 MXD1Q05195 221 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 MRGPRG-AS1Q2M3A8 158 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 ZNF562Q6V9R5 426 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 TSPAN14Q8NG11 270 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
SMG6-212ENST00000573153 YIPF6Q96EC8 236 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 GINS4Q9BRT9 223 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 NUBP2Q9Y5Y2 271 aa13.44□□□□□ -0.26
SMG6-212ENST00000573153 SSX5O60225 188 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 IGLV2-23P01705 113 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 LGALS7P47929 136 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 LUMP51884 338 aaPredicted RBP13.43□□□□□ -0.26
SMG6-212ENST00000573153 GNB1P62873 340 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 CROCCP3Q8IVE0 287 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 OR5H6Q8NGV6 325 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 DDB2Q92466 427 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 ADTRPQ96IZ2 230 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 VCX3AQ9NNX9 186 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 SLC35D1Q9NTN3 355 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 METTL1Q9UBP6 276 aaKnown RBP13.43□□□□□ -0.26
SMG6-212ENST00000573153 SCOCQ9UIL1 159 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 SPATA2Q9UM82 520 aa13.43□□□□□ -0.26
SMG6-212ENST00000573153 KMT2CQ8NEZ4 4911 aaKnown RBP13.43□□□□□ -0.26
SMG6-212ENST00000573153 CRYGBP07316 175 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 RRASP10301 218 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 RPS16P62249 146 aaKnown RBP13.42□□□□□ -0.26
SMG6-212ENST00000573153 PLGLAQ15195 96 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 AKIRIN2Q53H80 203 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 TMEM177Q53S58 311 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 IDNKQ5T6J7 187 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 CNIH2Q6PI25 160 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 NUDCD2Q8WVJ2 157 aa13.42□□□□□ -0.26
SMG6-212ENST00000573153 HUWE1Q7Z6Z7 4374 aaKnown RBP13.41□□□□□ -0.26
SMG6-212ENST00000573153 ARPC1BO15143 372 aaKnown RBP13.41□□□□□ -0.26
SMG6-212ENST00000573153 SLC22A5O76082 557 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 HLA-DQB1P01920 261 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 DUTP33316 252 aaKnown RBP13.41□□□□□ -0.26
SMG6-212ENST00000573153 RAB9AP51151 201 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 GNG2P59768 71 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 TMEM267Q0VDI3 215 aaPredicted RBP13.41□□□□□ -0.26
SMG6-212ENST00000573153 PYHIN1Q6K0P9 492 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 TMEM65Q6PI78 240 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 CASTOR1Q8WTX7 329 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 FAM103A1Q9BTL3 118 aaKnown RBP13.41□□□□□ -0.26
SMG6-212ENST00000573153 ST6GALNAC5Q9BVH7 336 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 ANXA10Q9UJ72 324 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 FOXA2Q9Y261 457 aaPredicted RBP13.41□□□□□ -0.26
SMG6-212ENST00000573153 VSIG4Q9Y279 399 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 OR2W1Q9Y3N9 320 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 TNCP24821 2201 aa13.41□□□□□ -0.26
SMG6-212ENST00000573153 AIREO43918 545 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 TUSC2O75896 110 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 CA2P00918 260 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 RTL8BQ17RB0 113 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 PPP1R27Q86WC6 154 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 ZNF645Q8N7E2 425 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 OR11H1Q8NG94 326 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 OR5M8Q8NGP6 311 aa13.4□□□□□ -0.26
SMG6-212ENST00000573153 ALX4Q9H161 411 aaPredicted RBP13.4□□□□□ -0.26
SMG6-212ENST00000573153 SRRM4A7MD48 611 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms