RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 HIST1H2BBP33778 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BDP58876 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BCP62807 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 TFF3Q07654 80 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST2H2BEQ16778 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 SMIM21Q3B7S5 101 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-212ENST00000573126 ZNF610Q8N9Z0 462 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BHQ93079 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BNQ99877 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HIST1H2BMQ99879 126 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 OPN3Q9H1Y3 402 aaPredicted RBP9.37□□□□□ -0.91
RPAIN-212ENST00000573126 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
RPAIN-212ENST00000573126 OTOGLQ3ZCN5 2332 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 MARCH11A6NNE9 402 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 FGF7P21781 194 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 GCH1P30793 250 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 CD81P60033 236 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 PDZD11Q5EBL8 140 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 SPNS3Q6ZMD2 512 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 CD177Q8N6Q3 437 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 OR10P1Q8NGE3 313 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 LRRC29Q8WV35 223 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 FAM234AQ9H0X4 552 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 SDF2L1Q9HCN8 221 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 MIOXQ9UGB7 285 aa9.37□□□□□ -0.91
RPAIN-212ENST00000573126 CEP250Q9BV73 2442 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 SPAARA0A1B0GVQ0 90 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 CLDN14O95500 239 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 MEF2BQ02080 365 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 ZNF718Q3SXZ3 478 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 C4orf17Q53FE4 359 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 WDR25Q64LD2 544 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 OR2Z1Q8NG97 314 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 GATAD1Q8WUU5 269 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 RPUSD4Q96CM3 377 aaKnown RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 SMIM7Q9BQ49 75 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 DUSP13Q9UII6 198 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 IGHV2OR16-5A0A0B4J2B6 119 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 PMS2P5A8MQ11 134 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 B4DEV8 164 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 CLDN34H7C241 214 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 CYB5R3P00387 301 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 HOXA5P20719 270 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 MDKP21741 143 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 ADIRFQ15847 76 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 SSX9Q7RTT3 188 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 FAM210BQ96KR6 192 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 P2RX4Q99571 388 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 AGMATQ9BSE5 352 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 TMEM147Q9BVK8 224 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 PARD6GQ9BYG4 376 aaPredicted RBP9.36□□□□□ -0.91
RPAIN-212ENST00000573126 TOLLIPQ9H0E2 274 aa9.36□□□□□ -0.91
RPAIN-212ENST00000573126 IGHV1-18A0A0C4DH31 117 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 IFNA1P01562 189 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 EGR1P18146 543 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 KITLGP21583 273 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 FFAR4Q5NUL3 377 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 GFI1BQ5VTD9 330 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 NCR3LG1Q68D85 454 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 C1orf87Q8N0U7 546 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 DEFB124Q8NES8 71 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 ACSF3Q4G176 576 aaPredicted RBP9.35□□□□□ -0.91
RPAIN-212ENST00000573126 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 NPCDR1Q9BY65 106 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 GNG12Q9UBI6 72 aa9.35□□□□□ -0.91
RPAIN-212ENST00000573126 IGHV3OR15-7A0A075B7D8 119 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 PRR33A8MZF0 331 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 C15orf65H3BRN8 121 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 AQP7O14520 342 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 SPINT2O43291 252 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 FCGR3BO75015 233 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 PROP1O75360 226 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 TNFSF13O75888 250 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 RD3LP0DJH9 198 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-212ENST00000573126 PRDX2P32119 198 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 CDX1P47902 265 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-212ENST00000573126 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 VKORC1L1Q8N0U8 176 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 SARAFQ96BY9 339 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 GGACTQ9BVM4 153 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
RPAIN-212ENST00000573126 TIMM9Q9Y5J7 89 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 DCHS1Q96JQ0 3298 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 TRAV17A0A0B4J275 112 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 IFNL4K9M1U5 179 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 RAB29O14966 203 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 BMP5P22003 454 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 C1orf162Q8NEQ5 155 aaPredicted RBP9.34□□□□□ -0.91
RPAIN-212ENST00000573126 FRZBQ92765 325 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 LURAP1Q96LR2 239 aa9.34□□□□□ -0.91
RPAIN-212ENST00000573126 HSD17B10Q99714 261 aaKnown RBP9.34□□□□□ -0.91
RPAIN-212ENST00000573126 DKK4Q9UBT3 224 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms