RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
NDE1-205ENST00000572756 CDX1P47902 265 aaPredicted RBP12.62□□□□□ -0.39
NDE1-205ENST00000572756 GNG2P59768 71 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 CX3CL1P78423 397 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 PSG5Q15238 335 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 ZNF660Q6AZW8 331 aaPredicted RBP12.62□□□□□ -0.39
NDE1-205ENST00000572756 CROCCP3Q8IVE0 287 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 MRPL41Q8IXM3 137 aaKnown RBP12.62□□□□□ -0.39
NDE1-205ENST00000572756 P2RX4Q99571 388 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 FBXO7Q9Y3I1 522 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 WSB1Q9Y6I7 421 aa12.62□□□□□ -0.39
NDE1-205ENST00000572756 TRAV18A0A075B6X5 111 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 NUDT19A8MXV4 375 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 CTXN2P0C2S0 81 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 EGR2P11161 476 aaPredicted RBP12.61□□□□□ -0.39
NDE1-205ENST00000572756 LSM3P62310 102 aaKnown RBP12.61□□□□□ -0.39
NDE1-205ENST00000572756 KIAA0141Q14154 515 aaPredicted RBP12.61□□□□□ -0.39
NDE1-205ENST00000572756 CNIH2Q6PI25 160 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 MINDY2Q8NBR6 621 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
NDE1-205ENST00000572756 SLC35D1Q9NTN3 355 aa12.61□□□□□ -0.39
NDE1-205ENST00000572756 TNCP24821 2201 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 TRAV41A0A0B4J266 112 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 IGLV2-23P01705 113 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 SMIM18P0DKX4 95 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 MYCNOSP40205 109 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
NDE1-205ENST00000572756 OR13F1Q8NGS4 319 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 DDB2Q92466 427 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 FLYWCH2Q96CP2 140 aaKnown RBP12.6□□□□□ -0.39
NDE1-205ENST00000572756 RCC1LQ96I51 464 aaKnown RBP12.6□□□□□ -0.39
NDE1-205ENST00000572756 RAX2Q96IS3 184 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 AUNIPQ9H7T9 357 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 TPSG1Q9NRR2 321 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 METTL1Q9UBP6 276 aaKnown RBP12.6□□□□□ -0.39
NDE1-205ENST00000572756 ANXA10Q9UJ72 324 aa12.6□□□□□ -0.39
NDE1-205ENST00000572756 HLA-DQB1P01920 261 aa12.59□□□□□ -0.39
NDE1-205ENST00000572756 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
NDE1-205ENST00000572756 DUTP33316 252 aaKnown RBP12.59□□□□□ -0.39
NDE1-205ENST00000572756 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
NDE1-205ENST00000572756 PLGLAQ15195 96 aa12.59□□□□□ -0.39
NDE1-205ENST00000572756 ZNF562Q6V9R5 426 aa12.59□□□□□ -0.39
NDE1-205ENST00000572756 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
NDE1-205ENST00000572756 OR2W1Q9Y3N9 320 aa12.59□□□□□ -0.39
NDE1-205ENST00000572756 RBM7Q9Y580 266 aaKnown RBP12.59□□□□□ -0.39
NDE1-205ENST00000572756 NUBP2Q9Y5Y2 271 aa12.59□□□□□ -0.39
NDE1-205ENST00000572756 IGKV1D-13A0A0B4J2D9 117 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 LINC00473A8K010 186 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 CCL24O00175 119 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 XRCC3O43542 346 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 SLC25A17O43808 307 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 SOX15O60248 233 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 TUSC2O75896 110 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 DUS4LO95620 317 aaKnown RBP12.58□□□□□ -0.4
NDE1-205ENST00000572756 IGLV2-14P01704 120 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
NDE1-205ENST00000572756 CRYGBP07316 175 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 IGKV1-13P0DP09 117 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 LGALS7P47929 136 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 NCS1P62166 190 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 SSBP2P81877 361 aaPredicted RBP12.58□□□□□ -0.4
NDE1-205ENST00000572756 TMEM177Q53S58 311 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 FOXB2Q5VYV0 432 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 HOGA1Q86XE5 327 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 GVQW1Q8N7I0 195 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 BVESQ8NE79 360 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 BEST4Q8NFU0 473 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 C4orf3Q8WVX3 66 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 SLC25A46Q96AG3 418 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 ADTRPQ96IZ2 230 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 DUX3Q96PT4 197 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 NECAP2Q9NVZ3 263 aa12.58□□□□□ -0.4
NDE1-205ENST00000572756 SRRM4A7MD48 611 aaKnown RBP12.57□□□□□ -0.4
NDE1-205ENST00000572756 CA2P00918 260 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 RRASP10301 218 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 PTHLHP12272 177 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 LUMP51884 338 aaPredicted RBP12.57□□□□□ -0.4
NDE1-205ENST00000572756 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 DEFB136Q30KP8 78 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 UBE2NLQ5JXB2 153 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 TCTEX1D1Q8N7M0 179 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 ZNF491Q8N8L2 437 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 KCTD12Q96CX2 325 aaKnown RBP12.57□□□□□ -0.4
NDE1-205ENST00000572756 UBE2E2Q96LR5 201 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 HARBI1Q96MB7 349 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 CLCC1Q96S66 551 aa12.57□□□□□ -0.4
NDE1-205ENST00000572756 J3QRK9 145 aa12.56□□□□□ -0.4
NDE1-205ENST00000572756 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
NDE1-205ENST00000572756 RAB9AP51151 201 aa12.56□□□□□ -0.4
NDE1-205ENST00000572756 VBP1P61758 197 aa12.56□□□□□ -0.4
NDE1-205ENST00000572756 RUNX1Q01196 453 aa12.56□□□□□ -0.4
NDE1-205ENST00000572756 EIF4EBP1Q13541 118 aaPredicted RBP12.56□□□□□ -0.4
NDE1-205ENST00000572756 FHL3Q13643 280 aa12.56□□□□□ -0.4
NDE1-205ENST00000572756 RTL8BQ17RB0 113 aa12.56□□□□□ -0.4
NDE1-205ENST00000572756 MRGPRG-AS1Q2M3A8 158 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms