RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 TMEM59Q9BXS4 323 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 FAM53CQ9NYF3 392 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 SIGLEC8Q9NYZ4 499 aa14.47□□□□□ -0.09
NUP88-203ENST00000572019 SRRM4A7MD48 611 aaKnown RBP14.46□□□□□ -0.09
NUP88-203ENST00000572019 BMPR1BO00238 502 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 SOCS1O15524 211 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 PRH1P02810 166 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 RPEL1Q2QD12 228 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 MOGAT2Q3SYC2 334 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 LAIR2Q6ISS4 152 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 PDPNQ86YL7 162 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 PTX4Q96A99 478 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 GHRLQ9UBU3 117 aa14.46□□□□□ -0.09
NUP88-203ENST00000572019 M0R1X1 148 aa14.45□□□□□ -0.1
NUP88-203ENST00000572019 ST3GAL4Q11206 333 aa14.45□□□□□ -0.1
NUP88-203ENST00000572019 SLC35D1Q9NTN3 355 aa14.45□□□□□ -0.1
NUP88-203ENST00000572019 COA4Q9NYJ1 87 aa14.45□□□□□ -0.1
NUP88-203ENST00000572019 KMT2AQ03164 3969 aa14.45□□□□□ -0.1
NUP88-203ENST00000572019 TRBV6-6A0A0A6YYG2 114 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 TMEM14DPA8MWL7 114 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 OR2A4O95047 310 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 CD3GP09693 182 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 ZBTB25P24278 435 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 ZNF45Q02386 682 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 C1orf100Q5SVJ3 147 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 PQLC1Q8N2U9 271 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 ADAD2Q8NCV1 583 aaKnown RBP14.44□□□□□ -0.1
NUP88-203ENST00000572019 IL17DQ8TAD2 202 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 LPAR5Q9H1C0 372 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 SRD5A3Q9H8P0 318 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 Q9N2K0 584 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 PLEKHJ1Q9NW61 149 aa14.44□□□□□ -0.1
NUP88-203ENST00000572019 SMPD3Q9NY59 655 aaPredicted RBP14.44□□□□□ -0.1
NUP88-203ENST00000572019 IRGMA1A4Y4 181 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 TPPPO94811 219 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 MOB1BQ7L9L4 216 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 ZNF555Q8NEP9 628 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 EDARADDQ8WWZ3 215 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 S100A14Q9HCY8 104 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 RDH8Q9NYR8 311 aa14.43□□□□□ -0.1
NUP88-203ENST00000572019 ZNF230Q9UIE0 474 aaPredicted RBP14.43□□□□□ -0.1
NUP88-203ENST00000572019 MSGN1A6NI15 193 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 FOXI3A8MTJ6 420 aaPredicted RBP14.42□□□□□ -0.1
NUP88-203ENST00000572019 APOA2P02652 100 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 UBBP0CG47 229 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 AADACP22760 399 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 EWSR1Q01844 656 aaKnown RBP eCLIP14.42□□□□□ -0.1
NUP88-203ENST00000572019 WDR89Q96FK6 387 aaPredicted RBP14.42□□□□□ -0.1
NUP88-203ENST00000572019 HARBI1Q96MB7 349 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 AKIP1Q9NQ31 210 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 ZNF221Q9UK13 617 aa14.42□□□□□ -0.1
NUP88-203ENST00000572019 OR11H12B2RN74 326 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 LY6G6CO95867 125 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 HLA-AP01891 365 aaKnown RBP14.41□□□□□ -0.1
NUP88-203ENST00000572019 TMEM50BP56557 158 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 TAS2R43P59537 309 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 DEFB114Q30KQ6 69 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 ACSM3Q53FZ2 586 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 IDO2Q6ZQW0 420 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 KCNG3Q8TAE7 436 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 USMG5Q96IX5 58 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 GFI1Q99684 422 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 SDHAF2Q9NX18 166 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 DMRT1Q9Y5R6 373 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 HERC2O95714 4834 aa14.41□□□□□ -0.1
NUP88-203ENST00000572019 EFCAB10A6NFE3 127 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 PPP5D1E7EU14 171 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 CD1AP06126 327 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 LGALS7P47929 136 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 WNT4P56705 351 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 RHOGP84095 191 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 EXOSC2Q13868 293 aaKnown RBP14.4□□□□□ -0.1
NUP88-203ENST00000572019 P2RY14Q15391 338 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 RBM48Q5RL73 367 aaKnown RBP14.4□□□□□ -0.1
NUP88-203ENST00000572019 OR2K2Q8NGT1 345 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 CYGBQ8WWM9 190 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 CACNG8Q8WXS5 425 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 SNAPC3Q92966 411 aa14.4□□□□□ -0.1
NUP88-203ENST00000572019 OR9G9P0C7N8 305 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 CD37P11049 281 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 GUCA2BQ16661 112 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 TATDN3Q17R31 274 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 C10orf55Q5SWW7 151 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 GLT8D1Q68CQ7 371 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 C19orf35Q6ZS72 473 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 AHSA2Q719I0 299 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 FAM89BQ8N5H3 189 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 ARHGAP5-AS1Q96IT6 56 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 TMEM68Q96MH6 324 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 PHB2Q99623 299 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 OVOL2Q9BRP0 275 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 OR2D2Q9H210 308 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 SLC2A8Q9NY64 477 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 PEMTQ9UBM1 199 aa14.39□□□□□ -0.11
NUP88-203ENST00000572019 DNAH10Q8IVF4 4471 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 C2orf70A6NJV1 201 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 GNAO1P09471 354 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 MAPK3P27361 379 aaPredicted RBP14.38□□□□□ -0.11
NUP88-203ENST00000572019 PLA2G7Q13093 441 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 PMS2P11Q13670 270 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms