RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 OR51J1Q9H342 316 aa8.01□□□□□ -1.13
GTF3C1-213ENST00000571886 SLC35D1Q9NTN3 355 aa8.01□□□□□ -1.13
GTF3C1-213ENST00000571886 ANXA10Q9UJ72 324 aa8.01□□□□□ -1.13
GTF3C1-213ENST00000571886 NOTCH3Q9UM47 2321 aa8.01□□□□□ -1.13
GTF3C1-213ENST00000571886 LINC00473A8K010 186 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 XRCC3O43542 346 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 SOX15O60248 233 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 SCGNO76038 276 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 IGHG4P01861 327 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 HLA-DQB1P01920 261 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 EIF4EP06730 217 aaKnown RBP8□□□□□ -1.13
GTF3C1-213ENST00000571886 CRYGBP07316 175 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 PF4V1P10720 104 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 IGLL1P15814 213 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 ALDH3B2P48448 385 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 RPL30P62888 115 aaKnown RBP8□□□□□ -1.13
GTF3C1-213ENST00000571886 CX3CL1P78423 397 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 CTF1Q16619 201 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 MRGPRG-AS1Q2M3A8 158 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 C19orf54Q5BKX5 351 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 GPR107Q5VW38 600 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 TEX38Q6PEX7 206 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 HOGA1Q86XE5 327 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 ANKRD13BQ86YJ7 626 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 SAMD12Q8N8I0 201 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 WFDC9Q8NEX5 89 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 DDB2Q92466 427 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 SNAPC3Q92966 411 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 DGCR14Q96DF8 476 aaKnown RBP8□□□□□ -1.13
GTF3C1-213ENST00000571886 GPHA2Q96T91 129 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 FAM103A1Q9BTL3 118 aaKnown RBP8□□□□□ -1.13
GTF3C1-213ENST00000571886 PARP11Q9NR21 331 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 DIABLOQ9NR28 239 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 ZFP57Q9NU63 452 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 KIAA1456Q9P272 454 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 METTL1Q9UBP6 276 aaKnown RBP8□□□□□ -1.13
GTF3C1-213ENST00000571886 OR2W1Q9Y3N9 320 aa8□□□□□ -1.13
GTF3C1-213ENST00000571886 RBM7Q9Y580 266 aaKnown RBP8□□□□□ -1.13
GTF3C1-213ENST00000571886 A0A0A6YYH2 397 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 A6NJ64 397 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 ARPC1BO15143 372 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 SLC25A17O43808 307 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 RBBP9O75884 186 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 TUSC2O75896 110 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 VDAC1P21796 283 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 PSMB8P28062 276 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 DUTP33316 252 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 THBS3P49746 956 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 TAS2R20P59543 309 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 SSBP2P81877 361 aaPredicted RBP7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 PJVKQ0ZLH3 352 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 FOXE3Q13461 319 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 EIF4EBP1Q13541 118 aaPredicted RBP7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 DEFB136Q30KP8 78 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 UBE2NLQ5JXB2 153 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 PDPNQ86YL7 162 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 CROCCP3Q8IVE0 287 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 MRPL41Q8IXM3 137 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 COMMD1Q8N668 190 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 RNF152Q8N8N0 203 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 KLHL30-AS1Q8NEE0 82 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 CASTOR1Q8WTX7 329 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 FLYWCH2Q96CP2 140 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 TSC22D3Q99576 134 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 RNF5Q99942 180 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 COMMD3Q9UBI1 195 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 ZNF580Q9UK33 172 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 NUBP2Q9Y5Y2 271 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 TNCP24821 2201 aa7.99□□□□□ -1.13
GTF3C1-213ENST00000571886 TRAV41A0A0B4J266 112 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 NUDT19A8MXV4 375 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 TMEM127O75204 238 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 GABARAPO95166 117 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 CA2P00918 260 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 APOA2P02652 100 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 PF4P02776 101 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 ELANEP08246 267 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 CTXN2P0C2S0 81 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 CD33P20138 364 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 AADACP22760 399 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 LUMP51884 338 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 BRWD1-AS2P59051 145 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 PLGLAQ15195 96 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 ECSCRQ19T08 205 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 PDLIM3Q53GG5 364 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 CXorf66Q5JRM2 361 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 KPRPQ5T749 579 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 ZNF660Q6AZW8 331 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 ZNF695Q8IW36 515 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 ZNF645Q8N7E2 425 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 LINC00482Q8N8I6 264 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 MINDY2Q8NBR6 621 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 MYOZ3Q8TDC0 251 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 S100A16Q96FQ6 103 aaKnown RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 RAX2Q96IS3 184 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 P2RX4Q99571 388 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 MRPS26Q9BYN8 205 aaKnown RBP7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 GNB4Q9HAV0 340 aa7.98□□□□□ -1.13
GTF3C1-213ENST00000571886 CCL28Q9NRJ3 127 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms