RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 PJVKQ0ZLH3 352 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 PLA2G7Q13093 441 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 SRSF7Q16629 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
NDE1-203ENST00000570727 PDPNQ86YL7 162 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 UFD1Q92890 307 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 CMSS1Q9BQ75 279 aaKnown RBP11.32□□□□□ -0.6
NDE1-203ENST00000570727 PLGRKTQ9HBL7 147 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 RDH8Q9NYR8 311 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 TNCP24821 2201 aa11.32□□□□□ -0.6
NDE1-203ENST00000570727 M0R1X1 148 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 CD3GP09693 182 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 IGHV4-30-4P0DP06 118 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 CLDN12P56749 244 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
NDE1-203ENST00000570727 RAB11BQ15907 218 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 C2orf76Q3KRA6 126 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 IL34Q6ZMJ4 242 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 GRPEL2Q8TAA5 225 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 C19orf73Q9NVV2 129 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 SCN3BQ9NY72 215 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 STUB1Q9UNE7 303 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 KCNK7Q9Y2U2 307 aa11.31□□□□□ -0.6
NDE1-203ENST00000570727 A8MZ25 164 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 H3BUA1 57 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 APOA2P02652 100 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 LYL1P12980 280 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 MRGPRG-AS1Q2M3A8 158 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 POC5Q8NA72 575 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.3□□□□□ -0.6
NDE1-203ENST00000570727 FAM3DQ96BQ1 224 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 CITED4Q96RK1 184 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 DUSP21Q9H596 190 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 RANGRFQ9HD47 186 aaPredicted RBP11.3□□□□□ -0.6
NDE1-203ENST00000570727 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
NDE1-203ENST00000570727 C13orf42A0A1B0GVH6 325 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 ANKRD34BA5PLL1 514 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
NDE1-203ENST00000570727 CNIH1O95406 144 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 HSMCR30P0CW71 290 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 ZP3P21754 424 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 LGALS7P47929 136 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 FABP5Q01469 135 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 TRAM1Q15629 374 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 IGSF11Q5DX21 431 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 ANKRD13BQ86YJ7 626 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 OR4A4PQ8NGN8 299 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 SDHAF2Q9NX18 166 aa11.29□□□□□ -0.6
NDE1-203ENST00000570727 GAR1Q9NY12 217 aaKnown RBP11.29□□□□□ -0.6
NDE1-203ENST00000570727 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
NDE1-203ENST00000570727 A0A0G2JLM5 398 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 TMEM272A0A1B0GTI8 110 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 DENRO43583 198 aaKnown RBP11.28□□□□□ -0.6
NDE1-203ENST00000570727 ARL6IP5O75915 188 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 BRI3O95415 125 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 GSTT2P0CG29 244 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 GSTT2BP0CG30 244 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
NDE1-203ENST00000570727 SERPINB10P48595 397 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 MOGAT2Q3SYC2 334 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 ADAM30Q9UKF2 790 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 RAB22AQ9UL26 194 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 V9GY05 133 aa11.28□□□□□ -0.6
NDE1-203ENST00000570727 EPPK1P58107 5090 aaKnown RBP11.28□□□□□ -0.6
NDE1-203ENST00000570727 TRBV6-7A0A0A0MS04 114 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 BET1O15155 118 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 FABP7O15540 132 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.61
NDE1-203ENST00000570727 TRBV12-3P01733 135 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 DEFA5Q01523 94 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
NDE1-203ENST00000570727 TMEM177Q53S58 311 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 ZNF343Q6P1L6 599 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 BVESQ8NE79 360 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 OR9G4Q8NGQ1 327 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 TMEM68Q96MH6 324 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 CABLES2Q9BTV7 478 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 TINAGL1Q9GZM7 467 aaPredicted RBP11.27□□□□□ -0.61
NDE1-203ENST00000570727 OR2D2Q9H210 308 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 VCXQ9H320 206 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 TPRKBQ9Y3C4 175 aa11.27□□□□□ -0.61
NDE1-203ENST00000570727 HYDINQ4G0P3 5121 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 FCGR3AP08637 254 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 PSMA1P25786 263 aaKnown RBP11.26□□□□□ -0.61
NDE1-203ENST00000570727 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 DYRK1AQ13627 763 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 HES5Q5TA89 166 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 NRG4Q8WWG1 115 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 RAB3CQ96E17 227 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 HARBI1Q96MB7 349 aa11.26□□□□□ -0.61
NDE1-203ENST00000570727 MGLLQ99685 303 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms