RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SPDEFO95238 335 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 APOA2P02652 100 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 TAGLNQ01995 201 aaKnown RBP9.13□□□□□ -0.95
CAPN3-220ENST00000569827 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-220ENST00000569827 LAIR2Q6ISS4 152 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 IDO2Q6ZQW0 420 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 Q8N402 240 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 HARBI1Q96MB7 349 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 NEURL2Q9BR09 285 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 TM2D1Q9BX74 207 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 TINAGL1Q9GZM7 467 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-220ENST00000569827 ZNF221Q9UK13 617 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 LRRC42Q9Y546 428 aa9.13□□□□□ -0.95
CAPN3-220ENST00000569827 A0A0G2JLM5 398 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 SHISA3A0PJX4 238 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 SRRM4A7MD48 611 aaKnown RBP9.12□□□□□ -0.95
CAPN3-220ENST00000569827 TMEM14DPA8MWL7 114 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 MYL12BO14950 172 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 CRYGBP07316 175 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 GNAO1P09471 354 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 ZBTB25P24278 435 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 WNT4P56705 351 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 TAS2R43P59537 309 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 QRFPP83859 136 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 MED21Q13503 144 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 MRGPRG-AS1Q2M3A8 158 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 ACSM3Q53FZ2 586 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 ZNF343Q6P1L6 599 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 LINC00322Q6ZN03 302 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-220ENST00000569827 C19orf35Q6ZS72 473 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 MOB1BQ7L9L4 216 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 PDPNQ86YL7 162 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 EDARADDQ8WWZ3 215 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 PHB2Q99623 299 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 RNF5Q99942 180 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 LPAR5Q9H1C0 372 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 OR2D2Q9H210 308 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 SRD5A3Q9H8P0 318 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 Q9N2K0 584 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 RDH8Q9NYR8 311 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 GHRLQ9UBU3 117 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
CAPN3-220ENST00000569827 EFCAB10A6NFE3 127 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 PPP5D1E7EU14 171 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 H3BUA1 57 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 BMPR1BO00238 502 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 ITGB1BP1O14713 200 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 TPPPO94811 219 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 HLA-AP01891 365 aaKnown RBP9.11□□□□□ -0.95
CAPN3-220ENST00000569827 UBBP0CG47 229 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 LGALS7P47929 136 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 PLA2G7Q13093 441 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 EXOSC2Q13868 293 aaKnown RBP9.11□□□□□ -0.95
CAPN3-220ENST00000569827 TNXAQ16473 311 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 GUCA2BQ16661 112 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 C1orf100Q5SVJ3 147 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 GLT8D1Q68CQ7 371 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 KCNG3Q8TAE7 436 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 CACNG8Q8WXS5 425 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 MAFIPQ8WZ33 124 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 ARHGAP5-AS1Q96IT6 56 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 GFI1Q99684 422 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 AKIP1Q9NQ31 210 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 SDHAF2Q9NX18 166 aa9.11□□□□□ -0.95
CAPN3-220ENST00000569827 NKX1-2Q9UD57 310 aaPredicted RBP9.11□□□□□ -0.95
CAPN3-220ENST00000569827 TRBV6-6A0A0A6YYG2 114 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 MSGN1A6NI15 193 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 ZNF785A8K8V0 405 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 BET1O15155 118 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 SHOXO15266 292 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 MAPK3P27361 379 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-220ENST00000569827 TMEM50BP56557 158 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 CLDN12P56749 244 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 RHOGP84095 191 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 ZNF45Q02386 682 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 IGSF11Q5DX21 431 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 C10orf55Q5SWW7 151 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 RNLSQ5VYX0 342 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 ADAD2Q8NCV1 583 aaKnown RBP9.1□□□□□ -0.95
CAPN3-220ENST00000569827 BPIFB6Q8NFQ5 453 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 PTX4Q96A99 478 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 WDR89Q96FK6 387 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-220ENST00000569827 CMSS1Q9BQ75 279 aaKnown RBP9.1□□□□□ -0.95
CAPN3-220ENST00000569827 PECRQ9BY49 303 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 ZNF230Q9UIE0 474 aaPredicted RBP9.1□□□□□ -0.95
CAPN3-220ENST00000569827 S4R3C0 116 aa9.1□□□□□ -0.95
CAPN3-220ENST00000569827 HERC2O95714 4834 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 FOXI3A8MTJ6 420 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-220ENST00000569827 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 MPPED1O15442 326 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 OR2A4O95047 310 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 BPNT1O95861 308 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 LY6G6CO95867 125 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 IGHV3-23P01764 117 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 AADACP22760 399 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 MECP2P51608 486 aaKnown RBP9.09□□□□□ -0.95
CAPN3-220ENST00000569827 MOGAT2Q3SYC2 334 aa9.09□□□□□ -0.95
CAPN3-220ENST00000569827 HSD17B12Q53GQ0 312 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms