RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 PLA2G12AQ9BZM1 189 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 DUSP21Q9H596 190 aa5.62□□□□□ -1.51
SMG1-217ENST00000569764 RBFOX1Q9NWB1 397 aaKnown RBP5.62□□□□□ -1.51
SMG1-217ENST00000569764 IGKV1D-16P01601 117 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 H2BFMP0C1H6 154 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 HERPUD1Q15011 391 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ALG10Q5BKT4 473 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 TOMM20LQ6UXN7 152 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 LINC01551Q86U37 167 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 OR2L13Q8N349 312 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 OR5AN1Q8NGI8 311 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 WDYHV1Q96HA8 205 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 SEC22AQ96IW7 307 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 PSMG3-AS1Q96PY0 264 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 GPER1Q99527 375 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 GINS3Q9BRX5 216 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 RNF167Q9H6Y7 350 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ELL3Q9HB65 397 aaPredicted RBP5.61□□□□□ -1.51
SMG1-217ENST00000569764 ZNF835Q9Y2P0 537 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 KIF26BQ2KJY2 2108 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 PCNX1Q96RV3 2341 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 TRAV18A0A075B6X5 111 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 SS18L1O75177 396 aaPredicted RBP5.61□□□□□ -1.51
SMG1-217ENST00000569764 YIF1AO95070 293 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 FGF2P09038 288 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 CD34P28906 385 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 BTG1P62324 171 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 TNFAIP6P98066 277 aaPredicted RBP5.61□□□□□ -1.51
SMG1-217ENST00000569764 CTF1Q16619 201 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 OR10K2Q6IF99 312 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ZNF788Q6ZQV5 615 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ABHD12Q8N2K0 398 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ZNF676Q8N7Q3 588 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ZNF519Q8TB69 540 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 SCGB3A2Q96PL1 93 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 RTL8AQ9BWD3 113 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 SLC7A10Q9NS82 523 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 RNF222A6NCQ9 220 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 FAM231BA6NCW3 169 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 HLA-AP01891 365 aaKnown RBP5.61□□□□□ -1.51
SMG1-217ENST00000569764 MT-ND4LP03901 98 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 OR5H8P0DN80 308 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 ZNF708P17019 499 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 CHATP28329 748 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 HIVEP2P31629 2446 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 OR12D2P58182 307 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 Q6ZSR3 168 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 MOB3BQ86TA1 216 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 KMT2EQ8IZD2 1858 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 OR4C13Q8NGP0 309 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 APOBEC3DQ96AK3 386 aaPredicted RBP5.61□□□□□ -1.51
SMG1-217ENST00000569764 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 CLCC1Q96S66 551 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 FOXB1Q99853 325 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 AURKAIP1Q9NWT8 199 aaPredicted RBP5.61□□□□□ -1.51
SMG1-217ENST00000569764 DOPEY2Q9Y3R5 2298 aa5.61□□□□□ -1.51
SMG1-217ENST00000569764 CPAMD8Q8IZJ3 1885 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 M0R082 166 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 LYZL6O75951 148 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 TSPAN15O95858 294 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 HAND1O96004 215 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 THBS3P49746 956 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 RUNX1Q01196 453 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 GLT8D1Q68CQ7 371 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 C15orf54Q8N8G6 183 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 NFAM1Q8NET5 270 aaPredicted RBP5.6□□□□□ -1.51
SMG1-217ENST00000569764 IL22RA2Q969J5 263 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 REG4Q9BYZ8 158 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 CHIAQ9BZP6 476 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 KLHDC2Q9Y2U9 406 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 ATMQ13315 3056 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 NPIPB9F8W1W9 429 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 J3QR06 171 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 GKN3PP0CG01 181 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 ZNF136P52737 540 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 EFNB2P52799 333 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PRR20EP86478 221 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PRR20CP86479 221 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PRR20DP86480 221 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PRR20BP86481 221 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PRR20AP86496 221 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PRR30Q53SZ7 412 aaPredicted RBP5.6□□□□□ -1.51
SMG1-217ENST00000569764 GDPGP1Q6ZNW5 385 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 TCF24Q7RTU0 167 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 OR1J1Q8NGS3 322 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 AP1S3Q96PC3 154 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 FANCD2OSQ96PS1 177 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 NDFIP1Q9BT67 221 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 PATZ1Q9HBE1 687 aaKnown RBP5.6□□□□□ -1.51
SMG1-217ENST00000569764 GALNT9Q9HCQ5 603 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 TAAR3PQ9P1P4 343 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 ZNF443Q9Y2A4 671 aaPredicted RBP5.6□□□□□ -1.51
SMG1-217ENST00000569764 A0A087WUU8 490 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 A0A0G2JNJ9 132 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 ZNF670-ZNF695F2Z2N8 137 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 CLPSP04118 112 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 FXYD6P3P58550 94 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 OPCMLQ14982 345 aa5.6□□□□□ -1.51
SMG1-217ENST00000569764 GUCA2BQ16661 112 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms